CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK14925
(
Drosophila willistoni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0216930
T44181_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0244068
RRM
37
107
IFVGGFPYTLTEGDLVCVFSQYGEVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIQITGRTLR
Links
Other
RRM
family RBPs
Other
Drosophila willistoni
RBPs
91 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GF14433
Drosophila ananassae
FBgn0091460
N
0.930
CG10466
Drosophila melanogaster
FBgn0032822
N
0.930
GM17378
Drosophila sechellia
FBgn0172288
N
0.930
GE13281
Drosophila yakuba
FBgn0230967
N
0.930
GD24233
Drosophila simulans
FBgn0195582
N
0.930
GG21207
Drosophila erecta
FBgn0113387
N
0.915
GH13830
Drosophila grimshawi
FBgn0121306
N
0.915
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.887
GL26176
Drosophila persimilis
FBgn0163758
N
0.887
GI11259
Drosophila mojavensis
FBgn0134020
N
0.887
GI20215
Drosophila mojavensis
FBgn0142951
N
0.887
GI11260
Drosophila mojavensis
FBgn0134021
N
0.887
GJ13600
Drosophila virilis
FBgn0200822
N
0.873
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.845
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.833
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.831
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.819
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.819
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.819
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.819
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.817
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.817
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.817
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.817
rbmx2
Danio rerio
ENSDARG00000044380
N
0.817
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.808
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.806
RBMX2
Homo sapiens
ENSG00000134597
N
0.806
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.806
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.806
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.806
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.806
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.806
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.806
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.806
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.806
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.806
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.806
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.806
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.806
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.806
AGAP000977
Anopheles gambiae
AGAP000977
N
0.803
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.797
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.792
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.792
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.792
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.792
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.789
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.789
AAEL002461
Aedes aegypti
AAEL002461
N
0.789
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.789
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.789
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.784
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.778
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.778
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.775
PHUM617480
Pediculus humanus
PHUM617480
N
0.775
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.775
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.775
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.775
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.775
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.764
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.764
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.764
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.761
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.761
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.750
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.746
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.746
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.746
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.746
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.746
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.746
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.746
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.743
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.743
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.743
145168
Helobdella robusta
145168
N
0.732
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.722
ISCW009356
Ixodes scapularis
ISCW009356
N
0.718
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.718
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.718
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.718
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.716
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.708
CRE26315
Caenorhabditis remanei
CRE26315
N
0.704
gw1.39.43.1
Selaginella moellendorfii
gw1.39.43.1
N
0.704
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.704
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.703
AAH56844
Xenopus laevis
AAH56844
N
0.703
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.703