CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE10821
(
Caenorhabditis remanei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CRE10821
T34391_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE10821
RRM
5
70
VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSESAEYELV
Links
Other
RRM
family RBPs
Other
Caenorhabditis remanei
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE10826
Caenorhabditis remanei
CRE10826
N
0.879
CBG17675
Caenorhabditis briggsae
CBG17675
N
0.879
CBN22494
Caenorhabditis brenneri
CBN22494
N
0.879
rsp-6
Caenorhabditis elegans
C33H5.12
N
0.879
CJA16130
Caenorhabditis japonica
CJA16130
N
0.848
LOAG_10696
Loa loa
LOAG_10696
N
0.742
WUBG_04043
Wuchereria bancrofti
WUBG_04043
N
0.742
Bm1_55500
Brugia malayi
Bm1_55500
N
0.742
Ppa-rsp-6
Pristionchus pacificus
PPA22370
N
0.712
Minc05171
Meloidogyne incognita
Minc05171
N
0.712