Ppa-rsp-6 (Pristionchus pacificus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PPA22370 T45816_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PPA22370 RRM 6 71

Links

Other RRM family RBPs
Other Pristionchus pacificus RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Minc03171 Meloidogyne incognita Minc03171 N 0.848
Minc03199 Meloidogyne incognita Minc03199 N 0.848
LOAG_10696 Loa loa LOAG_10696 N 0.833
WUBG_04043 Wuchereria bancrofti WUBG_04043 N 0.833
Bm1_55500 Brugia malayi Bm1_55500 N 0.833
CBN22494 Caenorhabditis brenneri CBN22494 N 0.818
CRE10826 Caenorhabditis remanei CRE10826 N 0.818
rsp-6 Caenorhabditis elegans C33H5.12 N 0.818
CBG17675 Caenorhabditis briggsae CBG17675 N 0.818
Minc05171 Meloidogyne incognita Minc05171 N 0.803
CJA16130 Caenorhabditis japonica CJA16130 N 0.803
PPA16762 Pristionchus pacificus PPA16762 N 0.788
LOAG_10698 Loa loa LOAG_10698 N 0.727
CRE10821 Caenorhabditis remanei CRE10821 N 0.712
WUBG_04041 Wuchereria bancrofti WUBG_04041 N 0.712