CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSACAG00000010826
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000010826
T34681_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000010623
RRM
55
122
LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPG
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSGALG00000018499
Gallus gallus
ENSGALG00000018499
N
1.000
TNRC4
Taeniopygia guttata
ENSTGUG00000001647
N
1.000
Celf4
Mus musculus
ENSMUSG00000024268
I
0.986
Celf4
Dipodomys ordii
ENSDORG00000007169
N
0.971
ACH69786
Xenopus laevis
ACH69786
N
0.870
zgc:165603
Danio rerio
ENSDARG00000078665
N
0.859
Celf6
Mus musculus
ENSMUSG00000032297
I
0.833
fgenesh2_pg.C_sca_131000025
Lottia gigantea
fgenesh2_pg.C_sca_131000025
N
0.806
63157
Helobdella robusta
63157
N
0.794
LOAG_12531
Loa loa
LOAG_12531
N
0.750
CJA22675
Caenorhabditis japonica
CJA22675
N
0.704