CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM25
(
Anolis carolinensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSACAG00000016239
T34735_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000016015
RRM
86
155
VFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPDSTLRALRLLHDLQIGEKKLL
Links
Other
RRM
family RBPs
Other
Anolis carolinensis
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM25
Taeniopygia guttata
ENSTGUG00000011246
N
1.000
RBM25
Procavia capensis
ENSPCAG00000006226
N
0.986
RBM25
Pan troglodytes
ENSPTRG00000006509
N
0.986
RGD1565486
Rattus norvegicus
ENSRNOG00000002871
N
0.986
RBM25
Ochotona princeps
ENSOPRG00000016744
N
0.986
RBM25
Oryctolagus cuniculus
ENSOCUG00000013737
N
0.986
RBM25
Monodelphis domestica
ENSMODG00000006820
N
0.986
Rbm25
Mus musculus
ENSMUSG00000010608
N
0.986
Q3ZCK6_BOVIN
Bos taurus
ENSBTAG00000017177
N
0.986
RBM25
Sorex araneus
ENSSARG00000002327
N
0.986
ENSSSCG00000002339
Sus scrofa
ENSSSCG00000002339
N
0.986
AAH45216
Xenopus laevis
AAH45216
N
0.986
AAI06691
Xenopus laevis
AAI06691
N
0.986
AAI24905
Xenopus laevis
AAI24905
N
0.986
Ame_R008393
Ailuropoda melanoleuca
Ame_R008393
N
0.986
rbm25
Xenopus tropicalis
ENSXETG00000021857
N
0.986
RBM25
Macaca mulatta
ENSMMUG00000002332
N
0.986
RBM25
Spermophilus tridecemlineatus
ENSSTOG00000011117
N
0.986
RBM25
Vicugna pacos
ENSVPAG00000009052
N
0.986
ENSSSCG00000002336
Sus scrofa
ENSSSCG00000002336
N
0.986
RBM25
Ornithorhynchus anatinus
ENSOANG00000001056
N
0.986
LOC100055577
Equus caballus
ENSECAG00000013395
N
0.986
RBM25
Erinaceus europaeus
ENSEEUG00000007350
N
0.986
RBM25
Echinops telfairi
ENSETEG00000015941
N
0.986
RBM25
Myotis lucifugus
ENSMLUG00000015434
N
0.986
RBM25
Cavia porcellus
ENSCPOG00000002479
N
0.986
RBM25
Canis familiaris
ENSCAFG00000016809
N
0.986
LOC100400201
Callithrix jacchus
ENSCJAG00000014441
N
0.986
RBM25
Homo sapiens
ENSG00000119707
N
0.986
RBM25
Dasypus novemcinctus
ENSDNOG00000004959
N
0.986
RBM25
Gallus gallus
ENSGALG00000009332
N
0.986
RBM25
Gorilla gorilla
ENSGGOG00000002415
N
0.986
RBM25
Loxodonta africana
ENSLAFG00000001074
N
0.986
ENSMGAG00000011708
Meleagris gallopavo
ENSMGAG00000011708
N
0.986
rbm25
Danio rerio
ENSDARG00000006395
N
0.957
ENSCJAG00000033489
Callithrix jacchus
ENSCJAG00000033489
N
0.957
RBM25
Tetraodon nigroviridis
ENSTNIG00000012222
N
0.943
RBM25
Takifugu rubripes
ENSTRUG00000017964
N
0.943
RBM25
Oryzias latipes
ENSORLG00000011874
N
0.943
RBM25
Gasterosteus aculeatus
ENSGACG00000013536
N
0.929
ENSDARG00000078091
Danio rerio
ENSDARG00000078091
N
0.929
RBM25
Gasterosteus aculeatus
ENSGACG00000012400
N
0.900
RBM25
Oryzias latipes
ENSORLG00000009958
N
0.900
RBM25
Takifugu rubripes
ENSTRUG00000003076
N
0.900
fgenesh2_pg.scaffold_196000039
Branchiostoma floridae
fgenesh2_pg.scaffold_196000039
N
0.800
ENSCING00000007913
Ciona intestinalis
ENSCING00000007913
N
0.743
fgeneshTA2_pg.C_scaffold_22000023
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_22000023
N
0.743
ENSCSAVG00000010097
Ciona savignyi
ENSCSAVG00000010097
N
0.743
XP_002157477.1
Hydra magnipapillata
XP_002157477.1
N
0.700