fgeneshTA2_pg.C_scaffold_22000023 (Trichoplax adhaerens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgeneshTA2_pg.C_scaffold_22000023 T52517_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgeneshTA2_pg.C_scaffold_22000023 RRM 104 173

Links

Other RRM family RBPs
Other Trichoplax adhaerens RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh2_pg.scaffold_196000039 Branchiostoma floridae fgenesh2_pg.scaffold_196000039 N 0.786
rbm25 Danio rerio ENSDARG00000006395 N 0.771
RBM25 Ornithorhynchus anatinus ENSOANG00000001056 N 0.757
RBM25 Ochotona princeps ENSOPRG00000016744 N 0.757
Rbm25 Mus musculus ENSMUSG00000010608 N 0.757
RBM25 Oryctolagus cuniculus ENSOCUG00000013737 N 0.757
RBM25 Macaca mulatta ENSMMUG00000002332 N 0.757
RBM25 Loxodonta africana ENSLAFG00000001074 N 0.757
Ame_R008393 Ailuropoda melanoleuca Ame_R008393 N 0.757
RBM25 Myotis lucifugus ENSMLUG00000015434 N 0.757
RBM25 Monodelphis domestica ENSMODG00000006820 N 0.757
RBM25 Procavia capensis ENSPCAG00000006226 N 0.757
RBM25 Spermophilus tridecemlineatus ENSSTOG00000011117 N 0.757
RBM25 Vicugna pacos ENSVPAG00000009052 N 0.757
rbm25 Xenopus tropicalis ENSXETG00000021857 N 0.757
ENSSSCG00000002339 Sus scrofa ENSSSCG00000002339 N 0.757
ENSSSCG00000002336 Sus scrofa ENSSSCG00000002336 N 0.757
RBM25 Pan troglodytes ENSPTRG00000006509 N 0.757
RGD1565486 Rattus norvegicus ENSRNOG00000002871 N 0.757
RBM25 Sorex araneus ENSSARG00000002327 N 0.757
RBM25 Gorilla gorilla ENSGGOG00000002415 N 0.757
ENSMGAG00000011708 Meleagris gallopavo ENSMGAG00000011708 N 0.757
Q3ZCK6_BOVIN Bos taurus ENSBTAG00000017177 N 0.757
AAI24905 Xenopus laevis AAI24905 N 0.757
RBM25 Cavia porcellus ENSCPOG00000002479 N 0.757
RBM25 Gallus gallus ENSGALG00000009332 N 0.757
LOC100400201 Callithrix jacchus ENSCJAG00000014441 N 0.757
RBM25 Dasypus novemcinctus ENSDNOG00000004959 N 0.757
LOC100055577 Equus caballus ENSECAG00000013395 N 0.757
AAI06691 Xenopus laevis AAI06691 N 0.757
AAH45216 Xenopus laevis AAH45216 N 0.757
RBM25 Homo sapiens ENSG00000119707 N 0.757
RBM25 Echinops telfairi ENSETEG00000015941 N 0.757
RBM25 Canis familiaris ENSCAFG00000016809 N 0.757
RBM25 Erinaceus europaeus ENSEEUG00000007350 N 0.757
RBM25 Anolis carolinensis ENSACAG00000016239 N 0.743
RBM25 Takifugu rubripes ENSTRUG00000017964 N 0.743
RBM25 Taeniopygia guttata ENSTGUG00000011246 N 0.743
RBM25 Tetraodon nigroviridis ENSTNIG00000012222 N 0.743
RBM25 Oryzias latipes ENSORLG00000011874 N 0.743
ENSCJAG00000033489 Callithrix jacchus ENSCJAG00000033489 N 0.729
RBM25 Gasterosteus aculeatus ENSGACG00000013536 N 0.729
ENSDARG00000078091 Danio rerio ENSDARG00000078091 N 0.729
XP_002157477.1 Hydra magnipapillata XP_002157477.1 N 0.714
RBM25 Takifugu rubripes ENSTRUG00000003076 N 0.714
RBM25 Gasterosteus aculeatus ENSGACG00000012400 N 0.714
RBM25 Oryzias latipes ENSORLG00000009958 N 0.714