ENSDARG00000078091 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000078091 T36249_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000099488 RRM 87 156

Links

Other RRM family RBPs
Other Danio rerio RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM25 Takifugu rubripes ENSTRUG00000003076 N 0.971
RBM25 Oryzias latipes ENSORLG00000009958 N 0.971
RBM25 Gasterosteus aculeatus ENSGACG00000012400 N 0.971
rbm25 Danio rerio ENSDARG00000006395 N 0.957
RBM25 Spermophilus tridecemlineatus ENSSTOG00000011117 N 0.943
RBM25 Vicugna pacos ENSVPAG00000009052 N 0.943
ENSSSCG00000002339 Sus scrofa ENSSSCG00000002339 N 0.943
RBM25 Dasypus novemcinctus ENSDNOG00000004959 N 0.943
RBM25 Sorex araneus ENSSARG00000002327 N 0.943
rbm25 Xenopus tropicalis ENSXETG00000021857 N 0.943
RGD1565486 Rattus norvegicus ENSRNOG00000002871 N 0.943
AAH45216 Xenopus laevis AAH45216 N 0.943
RBM25 Canis familiaris ENSCAFG00000016809 N 0.943
LOC100400201 Callithrix jacchus ENSCJAG00000014441 N 0.943
RBM25 Cavia porcellus ENSCPOG00000002479 N 0.943
Q3ZCK6_BOVIN Bos taurus ENSBTAG00000017177 N 0.943
AAI24905 Xenopus laevis AAI24905 N 0.943
RBM25 Pan troglodytes ENSPTRG00000006509 N 0.943
AAI06691 Xenopus laevis AAI06691 N 0.943
Ame_R008393 Ailuropoda melanoleuca Ame_R008393 N 0.943
ENSSSCG00000002336 Sus scrofa ENSSSCG00000002336 N 0.943
ENSMGAG00000011708 Meleagris gallopavo ENSMGAG00000011708 N 0.943
RBM25 Procavia capensis ENSPCAG00000006226 N 0.943
RBM25 Erinaceus europaeus ENSEEUG00000007350 N 0.943
RBM25 Myotis lucifugus ENSMLUG00000015434 N 0.943
RBM25 Loxodonta africana ENSLAFG00000001074 N 0.943
RBM25 Gorilla gorilla ENSGGOG00000002415 N 0.943
RBM25 Echinops telfairi ENSETEG00000015941 N 0.943
RBM25 Homo sapiens ENSG00000119707 N 0.943
RBM25 Gallus gallus ENSGALG00000009332 N 0.943
RBM25 Macaca mulatta ENSMMUG00000002332 N 0.943
LOC100055577 Equus caballus ENSECAG00000013395 N 0.943
RBM25 Oryctolagus cuniculus ENSOCUG00000013737 N 0.943
RBM25 Ochotona princeps ENSOPRG00000016744 N 0.943
Rbm25 Mus musculus ENSMUSG00000010608 N 0.943
RBM25 Ornithorhynchus anatinus ENSOANG00000001056 N 0.943
RBM25 Monodelphis domestica ENSMODG00000006820 N 0.943
RBM25 Oryzias latipes ENSORLG00000011874 N 0.929
ENSCJAG00000033489 Callithrix jacchus ENSCJAG00000033489 N 0.929
RBM25 Taeniopygia guttata ENSTGUG00000011246 N 0.929
RBM25 Anolis carolinensis ENSACAG00000016239 N 0.929
RBM25 Tetraodon nigroviridis ENSTNIG00000012222 N 0.929
RBM25 Takifugu rubripes ENSTRUG00000017964 N 0.929
RBM25 Gasterosteus aculeatus ENSGACG00000013536 N 0.886
fgenesh2_pg.scaffold_196000039 Branchiostoma floridae fgenesh2_pg.scaffold_196000039 N 0.814
ENSCSAVG00000010097 Ciona savignyi ENSCSAVG00000010097 N 0.757
ENSCING00000007913 Ciona intestinalis ENSCING00000007913 N 0.757
fgeneshTA2_pg.C_scaffold_22000023 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_22000023 N 0.729
Aqu1.225523 Amphimedon queenslandica Aqu1.225523 N 0.714
XP_002157477.1 Hydra magnipapillata XP_002157477.1 N 0.700