ENSCJAG00000034583 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000034583 T35728_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ENSGALG00000014267
M234_0.6 		Gallus gallus GAUGAW RNAcompete
Ray et al.(2013)
RNCMPT00279 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000044362 RRM 73 141
ENSCJAP00000044362 RRM 153 225
ENSCJAP00000044362 RRM 246 309

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM47 Echinops telfairi ENSETEG00000009194 I 0.758
LOC100410421 Callithrix jacchus ENSCJAG00000019385 I 0.758
RBM47 Choloepus hoffmanni ENSCHOG00000011731 I 0.758
RBM47 Gorilla gorilla ENSGGOG00000001367 I 0.754
RBM47 Macaca mulatta ENSMMUG00000012036 I 0.754
RBM47 Procavia capensis ENSPCAG00000011879 I 0.754
RBM47 Homo sapiens ENSG00000163694 I 0.754
RBM47 Pan troglodytes ENSPTRG00000016006 I 0.754
RBM47 Dasypus novemcinctus ENSDNOG00000006858 I 0.754
A5D9E0_BOVIN Bos taurus ENSBTAG00000002356 I 0.749
RBM47 Cavia porcellus ENSCPOG00000014100 I 0.749
RBM47 Tursiops truncatus ENSTTRG00000002839 I 0.749
RBM47 Sus scrofa ENSSSCG00000008796 I 0.749
RBM47 Oryctolagus cuniculus ENSOCUG00000012034 I 0.749
RBM47 Loxodonta africana ENSLAFG00000011998 I 0.749
Rbm47 Mus musculus ENSMUSG00000070780 I 0.749
RBM47 Felis catus ENSFCAG00000012399 I 0.744
Ame_R017652 Ailuropoda melanoleuca Ame_R017652 I 0.744
Rbm47 Rattus norvegicus ENSRNOG00000002408 I 0.744
RBM47 Sorex araneus ENSSARG00000001735 I 0.744
RBM47 Pteropus vampyrus ENSPVAG00000003812 I 0.739
ENSPPYG00000014688 Pongo pygmaeus ENSPPYG00000014688 I 0.736
LOC100063743 Equus caballus ENSECAG00000004400 I 0.730
RBM47_CANFA Canis familiaris ENSCAFG00000015898 I 0.730
ENSGALG00000014267 Gallus gallus ENSGALG00000014267 D 0.730
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.730
RBM47 Meleagris gallopavo ENSMGAG00000012226 I 0.730
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.730
RBM47 Taeniopygia guttata ENSTGUG00000008705 I 0.730
RBM47 Anolis carolinensis ENSACAG00000011833 I 0.720
RBM47 Ornithorhynchus anatinus ENSOANG00000008978 I 0.716
RBM47 Spermophilus tridecemlineatus ENSSTOG00000004727 I 0.706