CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDM1
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000001495
T35748_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000001351
RRM
27
89
TAEALHRSLSTALSRFGLLHSVRVLPNAAVARPGFYAVVKFYSARDARRAQKAFDGRPLAQSA
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDM1
Macaca mulatta
ENSMMUG00000006847
N
0.734
LOC100388328
Callithrix jacchus
ENSCJAG00000015031
N
0.734
ENSPPYG00000008198
Pongo pygmaeus
ENSPPYG00000008198
N
0.719
RDM1
Homo sapiens
ENSG00000187456
N
0.719
RDM1
Pan troglodytes
ENSPTRG00000009031
N
0.719
Rdm1
Rattus norvegicus
ENSRNOG00000020751
N
0.714
Rdm1
Mus musculus
ENSMUSG00000010362
N
0.714
RDM1
Gorilla gorilla
ENSGGOG00000010584
N
0.703
LOC100063820
Equus caballus
ENSECAG00000022182
N
0.703