LOC100388328 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000015031 T35619_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000027696 RRM 27 90
ENSCJAP00000027704 RRM 27 90
ENSCJAP00000027707 RRM 27 90
ENSCJAP00000027709 RRM 27 90
ENSCJAP00000044988 RRM 27 90
ENSCJAP00000045845 RRM 27 90
ENSCJAP00000049912 RRM 27 90

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RDM1 Pan troglodytes ENSPTRG00000009031 N 0.953
ENSPPYG00000008198 Pongo pygmaeus ENSPPYG00000008198 N 0.953
RDM1 Homo sapiens ENSG00000187456 N 0.953
RDM1 Macaca mulatta ENSMMUG00000006847 N 0.938
RDM1 Gorilla gorilla ENSGGOG00000010584 N 0.938
LOC100063820 Equus caballus ENSECAG00000022182 N 0.906
RDM1 Bos taurus ENSBTAG00000000030 N 0.875
Rdm1 Mus musculus ENSMUSG00000010362 N 0.844
RDM1 Pteropus vampyrus ENSPVAG00000001116 N 0.844
RDM1 Otolemur garnettii ENSOGAG00000011332 N 0.831
Rdm1 Rattus norvegicus ENSRNOG00000020751 N 0.828
RDM1 Loxodonta africana ENSLAFG00000029300 N 0.812
RDM1 Macropus eugenii ENSMEUG00000015826 N 0.797
RDM1 Felis catus ENSFCAG00000003868 N 0.773
RDM1 Monodelphis domestica ENSMODG00000011101 N 0.758
Ame_R020790 Ailuropoda melanoleuca Ame_R020790 N 0.742
ENSSSCG00000017574 Sus scrofa ENSSSCG00000017574 N 0.742
RDM1 Cavia porcellus ENSCPOG00000001495 N 0.734
RDM1 Oryctolagus cuniculus ENSOCUG00000022704 N 0.734
RDM1 Erinaceus europaeus ENSEEUG00000006127 N 0.727
RDM1 Tupaia belangeri ENSTBEG00000010030 N 0.712