g3bp1 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000017741 T36089_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
G3BP1
M302_0.6 		Homo sapiens Sequence logo not available ACCCMYMSGCMS SELEX
Cook et al.(2011)
432_11604510 		0.781
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000003185 RRM 345 408

Links

Other RRM family RBPs
Other Danio rerio RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
G3BP1 Oryzias latipes ENSORLG00000011422 I 0.953
G3BP1 Gasterosteus aculeatus ENSGACG00000016848 I 0.953
G3BP1 Tetraodon nigroviridis ENSTNIG00000012954 I 0.906
G3BP1 Ornithorhynchus anatinus ENSOANG00000005110 I 0.812
g3bp1 Xenopus tropicalis ENSXETG00000010712 I 0.812
G3BP1 Taeniopygia guttata ENSTGUG00000000753 I 0.812
G3BP1 Meleagris gallopavo ENSMGAG00000005963 I 0.812
G3bp1 Rattus norvegicus ENSRNOG00000013186 I 0.797
ENSSSCG00000017080 Sus scrofa ENSSSCG00000017080 I 0.781
AAH45051 Xenopus laevis AAH45051 I 0.781
ENSPPYG00000015968 Pongo pygmaeus ENSPPYG00000015968 I 0.781
G3BP1 Macaca mulatta ENSMMUG00000014701 I 0.781
G3BP1 Tarsius syrichta ENSTSYG00000004570 I 0.781
Ame_R008928 Ailuropoda melanoleuca Ame_R008928 I 0.781
G3BP1 Vicugna pacos ENSVPAG00000004461 I 0.781
G3BP1 Tupaia belangeri ENSTBEG00000004386 I 0.781
G3BP1 Dasypus novemcinctus ENSDNOG00000018758 I 0.781
ENSOCUG00000022143 Oryctolagus cuniculus ENSOCUG00000022143 I 0.781
ENSOCUG00000022069 Oryctolagus cuniculus ENSOCUG00000022069 I 0.781
G3BP1 Pan troglodytes ENSPTRG00000017438 I 0.781
LOC100060090 Equus caballus ENSECAG00000003368 I 0.781
G3BP1 Anolis carolinensis ENSACAG00000009792 I 0.781
G3BP1 Canis familiaris ENSCAFG00000017841 I 0.781
G3BP1 Loxodonta africana ENSLAFG00000009182 I 0.781
G3BP1 Echinops telfairi ENSETEG00000017447 I 0.781
G3BP1 Homo sapiens ENSG00000145907 D 0.781
ENSCHOG00000010802 Choloepus hoffmanni ENSCHOG00000010802 I 0.781
ENSSSCG00000017079 Sus scrofa ENSSSCG00000017079 I 0.781
G3BP1_BOVIN Bos taurus ENSBTAG00000020309 I 0.781
G3BP1 Myotis lucifugus ENSMLUG00000001581 I 0.781
G3BP1 Microcebus murinus ENSMICG00000012235 I 0.781
G3BP1 Pteropus vampyrus ENSPVAG00000017250 I 0.781
G3BP1 Erinaceus europaeus ENSEEUG00000012278 I 0.781
G3BP1 Callithrix jacchus ENSCJAG00000015407 I 0.781
G3bp1 Mus musculus ENSMUSG00000018583 I 0.766
ENSCPOG00000006626 Cavia porcellus ENSCPOG00000006626 I 0.766
AAH72830 Xenopus laevis AAH72830 I 0.766
XM_001369493.1 Monodelphis domestica ENSMODG00000008993 I 0.766
G3BP1 Ochotona princeps ENSOPRG00000010562 I 0.750
G3BP2 Oryzias latipes ENSORLG00000007012 I 0.731
G3BP1 Spermophilus tridecemlineatus ENSSTOG00000015928 I 0.719
Q5ZMN1_CHICK Gallus gallus ENSGALG00000004160 N 0.718
G3BP2 Anolis carolinensis ENSACAG00000008695 I 0.716
G3BP2 Tetraodon nigroviridis ENSTNIG00000011044 I 0.716
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.701
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.701
G3BP2 Takifugu rubripes ENSTRUG00000011405 I 0.701
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.701
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.701
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.701
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.701
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.701
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.701
G3BP2 Macropus eugenii ENSMEUG00000004126 I 0.701
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.701
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.701
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.701
G3BP2 Homo sapiens ENSG00000138757 D 0.701
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.701
G3BP2 Equus caballus ENSECAG00000007917 I 0.701
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.701
G3BP2 Felis catus ENSFCAG00000010124 I 0.701
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.701
G3BP2 Monodelphis domestica ENSMODG00000019205 I 0.701
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.701
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.701
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.701
G3BP2 Sorex araneus ENSSARG00000009503 I 0.701
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.701
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.701
G3bp2 Mus musculus ENSMUSG00000029405 I 0.701
ENSOANG00000004714 Ornithorhynchus anatinus ENSOANG00000004714 I 0.701
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.701
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.701
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.701