CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
G3bp1
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000018583
T39249_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP1
M302_0.6
Homo sapiens
Sequence logo not available
ACCCMYMSGCMS
SELEX
Cook et al.(2011)
432_11604510
0.953
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000018727
RRM
340
403
LFIGNLPHEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGA
ENSMUSP00000071259
RRM
340
362
LFIGNLPHEVDKSELKDFFQTHH
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
86 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
G3bp1
Rattus norvegicus
ENSRNOG00000013186
I
1.000
G3BP1
Dasypus novemcinctus
ENSDNOG00000018758
I
0.969
G3BP1
Erinaceus europaeus
ENSEEUG00000012278
I
0.969
G3BP1
Vicugna pacos
ENSVPAG00000004461
I
0.969
G3BP1
Tupaia belangeri
ENSTBEG00000004386
I
0.969
G3BP1_BOVIN
Bos taurus
ENSBTAG00000020309
I
0.969
ENSCHOG00000010802
Choloepus hoffmanni
ENSCHOG00000010802
I
0.969
G3BP1
Callithrix jacchus
ENSCJAG00000015407
I
0.969
G3BP1
Echinops telfairi
ENSETEG00000017447
I
0.969
LOC100060090
Equus caballus
ENSECAG00000003368
I
0.969
ENSOCUG00000022069
Oryctolagus cuniculus
ENSOCUG00000022069
I
0.969
ENSOCUG00000022143
Oryctolagus cuniculus
ENSOCUG00000022143
I
0.969
G3BP1
Myotis lucifugus
ENSMLUG00000001581
I
0.969
G3BP1
Macaca mulatta
ENSMMUG00000014701
I
0.969
G3BP1
Loxodonta africana
ENSLAFG00000009182
I
0.969
ENSSSCG00000017080
Sus scrofa
ENSSSCG00000017080
I
0.953
G3BP1
Tarsius syrichta
ENSTSYG00000004570
I
0.953
Ame_R008928
Ailuropoda melanoleuca
Ame_R008928
I
0.953
G3BP1
Canis familiaris
ENSCAFG00000017841
I
0.953
G3BP1
Homo sapiens
ENSG00000145907
D
0.953
ENSSSCG00000017079
Sus scrofa
ENSSSCG00000017079
I
0.953
G3BP1
Ochotona princeps
ENSOPRG00000010562
I
0.953
G3BP1
Pan troglodytes
ENSPTRG00000017438
I
0.953
G3BP1
Pteropus vampyrus
ENSPVAG00000017250
I
0.953
ENSPPYG00000015968
Pongo pygmaeus
ENSPPYG00000015968
I
0.953
G3BP1
Microcebus murinus
ENSMICG00000012235
I
0.953
ENSCPOG00000006626
Cavia porcellus
ENSCPOG00000006626
I
0.938
G3BP1
Taeniopygia guttata
ENSTGUG00000000753
I
0.891
G3BP1
Meleagris gallopavo
ENSMGAG00000005963
I
0.891
G3BP1
Ornithorhynchus anatinus
ENSOANG00000005110
I
0.875
G3BP1
Spermophilus tridecemlineatus
ENSSTOG00000015928
I
0.875
G3BP1
Felis catus
ENSFCAG00000006019
N
0.870
G3BP1
Tursiops truncatus
ENSTTRG00000009072
N
0.870
g3bp1
Xenopus tropicalis
ENSXETG00000010712
I
0.844
G3BP1
Anolis carolinensis
ENSACAG00000009792
I
0.812
XM_001369493.1
Monodelphis domestica
ENSMODG00000008993
I
0.797
G3BP1
Gasterosteus aculeatus
ENSGACG00000016848
I
0.797
G3BP1
Tetraodon nigroviridis
ENSTNIG00000012954
I
0.797
Q5ZMN1_CHICK
Gallus gallus
ENSGALG00000004160
N
0.789
g3bp1
Danio rerio
ENSDARG00000017741
I
0.766
G3BP1
Oryzias latipes
ENSORLG00000011422
I
0.766
AAH45051
Xenopus laevis
AAH45051
I
0.766
AAH72830
Xenopus laevis
AAH72830
I
0.750
G3BP2
Gallus gallus
ENSGALG00000010882
I
0.731
G3BP2
Meleagris gallopavo
ENSMGAG00000007221
I
0.731
G3BP2
Anolis carolinensis
ENSACAG00000008695
I
0.731
G3BP2
Taeniopygia guttata
ENSTGUG00000001561
I
0.731
g3bp2
Danio rerio
ENSDARG00000014790
I
0.731
XM_001367627.1
Monodelphis domestica
ENSMODG00000013903
N
0.718
G3BP2
Homo sapiens
ENSG00000138757
D
0.716
G3BP2
Loxodonta africana
ENSLAFG00000023321
I
0.716
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.716
G3BP2
Gorilla gorilla
ENSGGOG00000014947
I
0.716
G3BP2
Otolemur garnettii
ENSOGAG00000000157
I
0.716
G3BP2
Macaca mulatta
ENSMMUG00000002153
I
0.716
ENSOANG00000004714
Ornithorhynchus anatinus
ENSOANG00000004714
I
0.716
G3BP2
Monodelphis domestica
ENSMODG00000019205
I
0.716
G3BP2
Myotis lucifugus
ENSMLUG00000004753
I
0.716
G3BP2
Oryctolagus cuniculus
ENSOCUG00000003262
I
0.716
G3BP2
Ochotona princeps
ENSOPRG00000006307
I
0.716
G3BP2
Microcebus murinus
ENSMICG00000007795
I
0.716
G3BP2
Felis catus
ENSFCAG00000010124
I
0.716
G3BP2
Macropus eugenii
ENSMEUG00000004126
I
0.716
G3BP2
Pan troglodytes
ENSPTRG00000016175
I
0.716
G3BP2
Sorex araneus
ENSSARG00000009503
I
0.716
G3BP2
Cavia porcellus
ENSCPOG00000012052
I
0.716
G3BP2
Procavia capensis
ENSPCAG00000015109
I
0.716
LOC100413275
Callithrix jacchus
ENSCJAG00000019897
I
0.716
G3bp2
Mus musculus
ENSMUSG00000029405
I
0.716
G3BP2
Canis familiaris
ENSCAFG00000008371
I
0.716
ENSTBEG00000012323
Tupaia belangeri
ENSTBEG00000012323
I
0.716
Ame_R007258
Ailuropoda melanoleuca
Ame_R007258
I
0.716
G3bp2
Rattus norvegicus
ENSRNOG00000002433
I
0.716
G3BP2
Erinaceus europaeus
ENSEEUG00000013436
I
0.716
ENSPPYG00000014846
Pongo pygmaeus
ENSPPYG00000014846
I
0.716
G3BP2
Vicugna pacos
ENSVPAG00000010710
I
0.716
G3BP2
Equus caballus
ENSECAG00000007917
I
0.716
G3bp2
Dipodomys ordii
ENSDORG00000004825
I
0.716
G3BP2
Pteropus vampyrus
ENSPVAG00000010166
I
0.716
Q2KJ17_BOVIN
Bos taurus
ENSBTAG00000014041
I
0.716
G3BP2
Tursiops truncatus
ENSTTRG00000013795
I
0.701
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.701
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.701
G3BP2
Danio rerio
ENSDARG00000074572
I
0.701
ENSTBEG00000008258
Tupaia belangeri
ENSTBEG00000008258
I
0.701
G3BP2
Tetraodon nigroviridis
ENSTNIG00000011044
I
0.701