CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SART3
(
Dasypus novemcinctus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDNOG00000019498
T36388_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
SART3
M062_0.6
Homo sapiens
ARAAAAM
RNAcompete
Ray et al.(2013)
RNCMPT00064
0.745
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000015117
RRM
601
671
VFVSNLPYSMGEPDGKLRPLFETCGEVVEIRPIFSNRGDFRGYCYVEFKEEKSALQALELDRRNVEGRPMF
ENSDNOP00000015117
RRM
721
767
XXXDLRLVTNRAGKPKGLAYVEYEDESQASQAVLKMDGMTIKENVIK
Links
Other
RRM
family RBPs
Other
Dasypus novemcinctus
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SART3
Otolemur garnettii
ENSOGAG00000000932
I
0.866
SART3
Pteropus vampyrus
ENSPVAG00000007442
I
0.766
Ame_R009455
Ailuropoda melanoleuca
Ame_R009455
I
0.766
SART3
Loxodonta africana
ENSLAFG00000007167
I
0.766
SART3
Tupaia belangeri
ENSTBEG00000008888
I
0.759
SART3
Oryctolagus cuniculus
ENSOCUG00000016285
I
0.759
SART3
Microcebus murinus
ENSMICG00000013052
I
0.759
ENSPPYG00000004919
Pongo pygmaeus
ENSPPYG00000004919
I
0.752
SART3
Canis familiaris
ENSCAFG00000011352
I
0.752
SART3
Echinops telfairi
ENSETEG00000011292
I
0.752
SART3
Macaca mulatta
ENSMMUG00000017124
I
0.752
SART3
Felis catus
ENSFCAG00000014041
I
0.752
SART3
Pan troglodytes
ENSPTRG00000005404
I
0.745
SART3
Procavia capensis
ENSPCAG00000007505
I
0.745
SART3
Callithrix jacchus
ENSCJAG00000015330
I
0.745
SART3
Homo sapiens
ENSG00000075856
D
0.745
Sart3
Rattus norvegicus
ENSRNOG00000000702
I
0.745
SART3
Gorilla gorilla
ENSGGOG00000011562
I
0.745
SART3
Cavia porcellus
ENSCPOG00000010969
I
0.738
Sart3
Mus musculus
ENSMUSG00000018974
I
0.723
Q4KU45_HORSE
Equus caballus
ENSECAG00000000314
I
0.723
SART3
Monodelphis domestica
ENSMODG00000002859
I
0.723
SART3
Macropus eugenii
ENSMEUG00000006799
I
0.723
SART3
Spermophilus tridecemlineatus
ENSSTOG00000002376
I
0.716
SART3
Erinaceus europaeus
ENSEEUG00000002954
I
0.716
SART3
Ornithorhynchus anatinus
ENSOANG00000008794
I
0.709
Sart3
Dipodomys ordii
ENSDORG00000014360
N
0.706