CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Celf3
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000002488
T36422_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000002337
RRM
1
29
CAFLTYCARDSALKAQSALHEQKTLPGMN
ENSDORP00000002337
RRM
47
113
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPX
ENSDORP00000002337
RRM
332
373
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCF
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF3
Microcebus murinus
ENSMICG00000010644
N
0.800
CELF3
Dasypus novemcinctus
ENSDNOG00000011384
N
0.784
CELF3
Erinaceus europaeus
ENSEEUG00000010622
N
0.767
CELF3
Tursiops truncatus
ENSTTRG00000009835
N
0.758
CELF3
Homo sapiens
ENSG00000159409
I
0.751
CELF3
Macaca mulatta
ENSMMUG00000016952
I
0.727
CELF3
Takifugu rubripes
ENSTRUG00000012064
I
0.701