CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF3
(
Tursiops truncatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTTRG00000009835
T42616_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000009316
RRM
13
79
TQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGXX
ENSTTRP00000009316
RRM
97
165
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGAS
ENSTTRP00000009316
RRM
382
423
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCF
Links
Other
RRM
family RBPs
Other
Tursiops truncatus
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF3
Dasypus novemcinctus
ENSDNOG00000011384
N
0.972
CELF3
Erinaceus europaeus
ENSEEUG00000010622
N
0.868
CELF3
Sus scrofa
ENSSSCG00000006618
I
0.846
ENSGGOG00000021973
Gorilla gorilla
ENSGGOG00000021973
I
0.846
CELF3
Homo sapiens
ENSG00000159409
I
0.846
CELF3
Procavia capensis
ENSPCAG00000001623
I
0.832
CELF3
Ochotona princeps
ENSOPRG00000011130
I
0.832
CELF3
Loxodonta africana
ENSLAFG00000030147
I
0.829
Ame_R007421
Ailuropoda melanoleuca
Ame_R007421
I
0.829
CELF3
Pan troglodytes
ENSPTRG00000001293
I
0.829
Celf3
Mus musculus
ENSMUSG00000028137
I
0.829
B7NZE2_RABIT
Oryctolagus cuniculus
ENSOCUG00000003551
I
0.829
CELF3
Monodelphis domestica
ENSMODG00000018897
I
0.829
CELF3
Equus caballus
ENSECAG00000020365
I
0.829
CELF3
Canis familiaris
ENSCAFG00000012794
I
0.829
CELF3_BOVIN
Bos taurus
ENSBTAG00000019131
I
0.829
D4A916_RAT
Rattus norvegicus
ENSRNOG00000020875
I
0.829
CELF3
Cavia porcellus
ENSCPOG00000003539
I
0.829
CELF3
Callithrix jacchus
ENSCJAG00000007857
I
0.829
AAA81375
Xenopus laevis
AAA81375
I
0.763
Q91579
Xenopus laevis
Q91579
I
0.763
AAH72134
Xenopus laevis
AAH72134
I
0.763
AAH57704
Xenopus laevis
AAH57704
I
0.763
Celf3
Dipodomys ordii
ENSDORG00000002488
N
0.758
AAH46942
Xenopus laevis
AAH46942
I
0.758
Q7ZWM3
Xenopus laevis
Q7ZWM3
I
0.758
CELF3
Gasterosteus aculeatus
ENSGACG00000003274
I
0.754
CELF3
Gasterosteus aculeatus
ENSGACG00000011707
I
0.749
CELF3
Macaca mulatta
ENSMMUG00000016952
I
0.745
CELF3
Tetraodon nigroviridis
ENSTNIG00000008062
I
0.744
CELF3
Takifugu rubripes
ENSTRUG00000014225
I
0.730
celf3
Danio rerio
ENSDARG00000034668
I
0.730
CELF3
Danio rerio
ENSDARG00000006983
I
0.724
CELF3
Oryzias latipes
ENSORLG00000010447
I
0.717
CELF3
Pteropus vampyrus
ENSPVAG00000015012
N
0.715