CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF3
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000010622
T36818_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000009696
RRM
9
78
LFVGQIPRHLEEKDFTLSFVQFRRMFELTFIKHQSTCWCKGCAFLTYCARDSALKAQSALHEQKTLPGMN
ENSEEUP00000009696
RRM
97
163
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPX
ENSEEUP00000009696
RRM
380
422
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFX
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF3
Dasypus novemcinctus
ENSDNOG00000011384
N
0.894
CELF3
Tursiops truncatus
ENSTTRG00000009835
N
0.868
CELF3_BOVIN
Bos taurus
ENSBTAG00000019131
I
0.773
CELF3
Canis familiaris
ENSCAFG00000012794
I
0.773
CELF3
Homo sapiens
ENSG00000159409
I
0.773
CELF3
Callithrix jacchus
ENSCJAG00000007857
I
0.773
CELF3
Equus caballus
ENSECAG00000020365
I
0.773
CELF3
Cavia porcellus
ENSCPOG00000003539
I
0.773
D4A916_RAT
Rattus norvegicus
ENSRNOG00000020875
I
0.773
Ame_R007421
Ailuropoda melanoleuca
Ame_R007421
I
0.773
CELF3
Monodelphis domestica
ENSMODG00000018897
I
0.773
Celf3
Mus musculus
ENSMUSG00000028137
I
0.773
B7NZE2_RABIT
Oryctolagus cuniculus
ENSOCUG00000003551
I
0.773
ENSGGOG00000021973
Gorilla gorilla
ENSGGOG00000021973
I
0.773
CELF3
Pan troglodytes
ENSPTRG00000001293
I
0.773
CELF3
Loxodonta africana
ENSLAFG00000030147
I
0.773
Celf3
Dipodomys ordii
ENSDORG00000002488
N
0.767
CELF3
Ochotona princeps
ENSOPRG00000011130
I
0.766
CELF3
Sus scrofa
ENSSSCG00000006618
I
0.754
CELF3
Procavia capensis
ENSPCAG00000001623
I
0.744
AAH72134
Xenopus laevis
AAH72134
I
0.711
AAA81375
Xenopus laevis
AAA81375
I
0.711
AAH57704
Xenopus laevis
AAH57704
I
0.711
Q91579
Xenopus laevis
Q91579
I
0.711
Q7ZWM3
Xenopus laevis
Q7ZWM3
I
0.706
AAH46942
Xenopus laevis
AAH46942
I
0.706