CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF3
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000010644
T38549_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000009709
RRM
1
29
CAFLTYCARDSALKAQSALHEQKTLPGMN
ENSMICP00000009709
RRM
48
116
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGAS
ENSMICP00000009709
RRM
332
402
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF3
Homo sapiens
ENSG00000159409
I
0.939
CELF3
Macaca mulatta
ENSMMUG00000016952
I
0.909
CELF3
Takifugu rubripes
ENSTRUG00000012064
I
0.884
CELF3
Procavia capensis
ENSPCAG00000001623
I
0.820
CELF6
Cavia porcellus
ENSCPOG00000025842
I
0.819
celf4
Danio rerio
ENSDARG00000070045
I
0.818
CELF5
Tursiops truncatus
ENSTTRG00000009625
I
0.817
CELF5
Pteropus vampyrus
ENSPVAG00000014619
I
0.817
CELF3
Sus scrofa
ENSSSCG00000006618
I
0.816
ENSGGOG00000021973
Gorilla gorilla
ENSGGOG00000021973
I
0.816
CELF5
Canis familiaris
ENSCAFG00000019263
I
0.812
BRUNOL5
Taeniopygia guttata
ENSTGUG00000000514
I
0.806
CELF5
Meleagris gallopavo
ENSMGAG00000001169
I
0.806
CELF5
Bos taurus
ENSBTAG00000021774
I
0.806
CELF3
Monodelphis domestica
ENSMODG00000018897
I
0.805
CELF3
Cavia porcellus
ENSCPOG00000003539
I
0.805
CELF3
Equus caballus
ENSECAG00000020365
I
0.805
CELF3
Callithrix jacchus
ENSCJAG00000007857
I
0.805
CELF3
Canis familiaris
ENSCAFG00000012794
I
0.805
CELF3_BOVIN
Bos taurus
ENSBTAG00000019131
I
0.805
CELF3
Pan troglodytes
ENSPTRG00000001293
I
0.805
Celf3
Mus musculus
ENSMUSG00000028137
I
0.805
CELF3
Loxodonta africana
ENSLAFG00000030147
I
0.805
Ame_R007421
Ailuropoda melanoleuca
Ame_R007421
I
0.805
B7NZE2_RABIT
Oryctolagus cuniculus
ENSOCUG00000003551
I
0.805
D4A916_RAT
Rattus norvegicus
ENSRNOG00000020875
I
0.805
CELF3
Ochotona princeps
ENSOPRG00000011130
I
0.802
CELF5
Sus scrofa
ENSSSCG00000013476
I
0.801
Celf3
Dipodomys ordii
ENSDORG00000002488
N
0.800
CELF5
Procavia capensis
ENSPCAG00000002170
I
0.800
CELF5
Echinops telfairi
ENSETEG00000016221
I
0.799
CELF5
Otolemur garnettii
ENSOGAG00000014161
I
0.799
Celf5
Dipodomys ordii
ENSDORG00000005915
I
0.793
AAH57704
Xenopus laevis
AAH57704
I
0.762
AAH72134
Xenopus laevis
AAH72134
I
0.762
Q91579
Xenopus laevis
Q91579
I
0.762
AAA81375
Xenopus laevis
AAA81375
I
0.762
Q7ZWM3
Xenopus laevis
Q7ZWM3
I
0.752
AAH46942
Xenopus laevis
AAH46942
I
0.752
CELF3
Gasterosteus aculeatus
ENSGACG00000011707
I
0.743
CELF3
Tetraodon nigroviridis
ENSTNIG00000008062
I
0.738
CELF3
Gasterosteus aculeatus
ENSGACG00000003274
I
0.738
CELF3
Oryzias latipes
ENSORLG00000010447
I
0.725
celf3
Danio rerio
ENSDARG00000034668
I
0.724
CELF3
Takifugu rubripes
ENSTRUG00000014225
I
0.719
CELF6
Vicugna pacos
ENSVPAG00000002850
N
0.708
CELF3
Danio rerio
ENSDARG00000006983
I
0.705