LOC100054907 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000013936 T36632_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.761
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000011711 RRM 106 159

Links

Other RRM family RBPs
Other Equus caballus RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.964
SNRNP70 Felis catus ENSFCAG00000006683 I 0.964
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.964
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.931
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.915
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.915
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.915
SNRNP70 Homo sapiens ENSG00000104852 D 0.915
SNRNP70 Taeniopygia guttata ENSTGUG00000016869 N 0.852
fgenesh2_pm.scaffold_94000015 Branchiostoma floridae fgenesh2_pm.scaffold_94000015 N 0.782
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.761
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.761
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.761
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.761
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.761
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.761
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.761
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.761
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.761
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.761
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.761
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.761
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.761
AAEL011340 Aedes aegypti AAEL011340 N 0.759
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.746
SNRNP70 Oryzias latipes ENSORLG00000017158 I 0.742
e_gw1.37.6.1 Capitella teleta e_gw1.37.6.1 N 0.727
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.718
Aqu1.211845 Amphimedon queenslandica Aqu1.211845 N 0.709
SNRNP70 Monodelphis domestica ENSMODG00000023381 I 0.706
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.704