SNRNP70 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000009202 T42282_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.944
snRNP70K
M134_0.6 		Drosophila melanogaster AUCAHG RNAcompete
Ray et al.(2013)
RNCMPT00143 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000023148 RRM 105 175
ENSTRUP00000023149 RRM 105 175
ENSTRUP00000023150 RRM 105 175
ENSTRUP00000023151 RRM 105 175

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.986
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.944
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.944
SNRNP70 Homo sapiens ENSG00000104852 D 0.944
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.944
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.944
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.944
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.944
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.944
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.944
snrnp70 Danio rerio ENSDARG00000077126 I 0.944
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.944
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.944
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.944
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.944
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.944
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.944
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.944
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.944
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.944
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.944
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.944
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.930
snrnp70 Xenopus tropicalis ENSXETG00000022919 I 0.930
ISCW021751 Ixodes scapularis ISCW021751 I 0.859
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.845
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.845
SNRNP70 Macropus eugenii ENSMEUG00000015650 I 0.818
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.817
nasonia_NCBI_hmm246143 Nasonia vitripennis nasonia_NCBI_hmm246143 I 0.817
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.817
PHUM022320 Pediculus humanus PHUM022320 I 0.817
NCBI_GNO_5600020 Daphnia pulex NCBI_GNO_5600020 I 0.817
AAH81025 Xenopus laevis AAH81025 I 0.808
AAH97714 Xenopus laevis AAH97714 I 0.808
P09406 Xenopus laevis P09406 I 0.808
AAI08448 Xenopus laevis AAI08448 I 0.808
CAA30972 Xenopus laevis CAA30972 I 0.808
XP_001193416.1 Strongylocentrotus purpuratus XP_001193416.1 I 0.803
AGAP006755 Anopheles gambiae AGAP006755 I 0.803
XP_781203.2 Strongylocentrotus purpuratus XP_781203.2 I 0.803
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.775
e_gw.153.81.1 Nematostella vectensis e_gw.153.81.1 I 0.761
GI24161 Drosophila mojavensis FBgn0146884 I 0.761
GE18384 Drosophila yakuba FBgn0235804 I 0.746
GK18098 Drosophila willistoni FBgn0220097 I 0.746
SNRNP70 Oryzias latipes ENSORLG00000017158 I 0.746
GJ21434 Drosophila virilis FBgn0208560 I 0.746
GD22521 Drosophila simulans FBgn0193923 I 0.746
GF14460 Drosophila ananassae FBgn0091487 I 0.746
snRNP70K Drosophila melanogaster FBgn0016978 D 0.746
GA21298-RA Drosophila pseudoobscura FBgn0081286 I 0.746
GM13669 Drosophila sechellia FBgn0168600 I 0.746
GH13577 Drosophila grimshawi FBgn0121053 I 0.746
GG23559 Drosophila erecta FBgn0115705 I 0.746
ENSCSAVG00000010109 Ciona savignyi ENSCSAVG00000010109 I 0.732
113249 Helobdella robusta 113249 I 0.724
SNRNP70 Felis catus ENSFCAG00000006683 I 0.704
Glyma01g38120.1 Glycine max Glyma01g38120.1 N 0.704
MDP0000744216 Malus x domestica MDP0000744216 N 0.704
SNRNP70 Monodelphis domestica ENSMODG00000023381 I 0.704
LOC100054907 Equus caballus ENSECAG00000013936 I 0.704
Cucsa.127380 Cucumis sativus Cucsa.127380 I 0.704
B9HEV8_POPTR Populus trichocarpa POPTR_0007s12690 I 0.704
ENSCING00000006015 Ciona intestinalis ENSCING00000006015 N 0.703