snrnp70 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000022919 T42948_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SNRNP70
M068_0.6 		Homo sapiens RWUCAAG RNAcompete
Ray et al.(2013)
RNCMPT00070 		0.986
snRNP70K
M134_0.6 		Drosophila melanogaster AUCAHG RNAcompete
Ray et al.(2013)
RNCMPT00143 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000049555 RRM 105 175

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNRNP70 Erinaceus europaeus ENSEEUG00000005666 I 0.986
SNRNP70 Homo sapiens ENSG00000104852 D 0.986
SNRNP70 Loxodonta africana ENSLAFG00000028536 I 0.986
SNRNP70 Myotis lucifugus ENSMLUG00000011766 I 0.986
Snrnp70 Dipodomys ordii ENSDORG00000010228 I 0.986
Ame_R005855 Ailuropoda melanoleuca Ame_R005855 I 0.986
RU17_BOVIN Bos taurus ENSBTAG00000001996 I 0.986
SNRNP70 Canis familiaris ENSCAFG00000003711 I 0.986
LOC100392779 Callithrix jacchus ENSCJAG00000000193 I 0.986
SNRNP70 Cavia porcellus ENSCPOG00000019589 I 0.986
SNRNP70 Macaca mulatta ENSMMUG00000004928 I 0.986
SNRNP70 Gorilla gorilla ENSGGOG00000008245 I 0.986
ENSPPYG00000010234 Pongo pygmaeus ENSPPYG00000010234 I 0.986
SNRNP70 Pan troglodytes ENSPTRG00000011277 I 0.986
SNRNP70 Tursiops truncatus ENSTTRG00000017099 I 0.986
Snrnp70 Rattus norvegicus ENSRNOG00000020763 I 0.986
SNRNP70 Spermophilus tridecemlineatus ENSSTOG00000013988 I 0.986
SNRNP70 Oryctolagus cuniculus ENSOCUG00000015081 I 0.986
Snrnp70 Mus musculus ENSMUSG00000063511 I 0.986
SNRNP70 Ornithorhynchus anatinus ENSOANG00000005213 I 0.986
SNRNP70 Anolis carolinensis ENSACAG00000013276 I 0.972
SNRNP70 Gasterosteus aculeatus ENSGACG00000000448 I 0.944
SNRNP70 Takifugu rubripes ENSTRUG00000009202 I 0.930
snrnp70 Danio rerio ENSDARG00000077126 I 0.930
SNRNP70 Pteropus vampyrus ENSPVAG00000009578 I 0.887
BGIBMGA011988 Bombyx mori BGIBMGA011988 I 0.887
ISCW021751 Ixodes scapularis ISCW021751 I 0.859
AAH81025 Xenopus laevis AAH81025 I 0.846
P09406 Xenopus laevis P09406 I 0.846
AAI08448 Xenopus laevis AAI08448 I 0.846
CAA30972 Xenopus laevis CAA30972 I 0.846
AAH97714 Xenopus laevis AAH97714 I 0.846
DGIL_AUG5s10626g1p1t1 Acyrtosiphon pisum DGIL_AUG5s10626g1p1t1 I 0.845
PHUM022320 Pediculus humanus PHUM022320 I 0.845
nasonia_NCBI_hmm246143 Nasonia vitripennis nasonia_NCBI_hmm246143 I 0.845
amel4_ncbi_hmm14979 Apis mellifera amel4_ncbi_hmm14979 I 0.845
AGAP006755 Anopheles gambiae AGAP006755 I 0.817
SNRNP70 Macropus eugenii ENSMEUG00000015650 I 0.805
NCBI_GNO_5600020 Daphnia pulex NCBI_GNO_5600020 I 0.803
DGIL_AUG5s10040g3t1 Acyrtosiphon pisum DGIL_AUG5s10040g3t1 I 0.803
e_gw.153.81.1 Nematostella vectensis e_gw.153.81.1 I 0.789
XP_781203.2 Strongylocentrotus purpuratus XP_781203.2 I 0.789
XP_001193416.1 Strongylocentrotus purpuratus XP_001193416.1 I 0.789
GI24161 Drosophila mojavensis FBgn0146884 I 0.789
GH13577 Drosophila grimshawi FBgn0121053 I 0.775
GE18384 Drosophila yakuba FBgn0235804 I 0.775
GJ21434 Drosophila virilis FBgn0208560 I 0.775
GM13669 Drosophila sechellia FBgn0168600 I 0.775
GD22521 Drosophila simulans FBgn0193923 I 0.775
GK18098 Drosophila willistoni FBgn0220097 I 0.775
GA21298-RA Drosophila pseudoobscura FBgn0081286 I 0.775
GG23559 Drosophila erecta FBgn0115705 I 0.775
GF14460 Drosophila ananassae FBgn0091487 I 0.775
snRNP70K Drosophila melanogaster FBgn0016978 D 0.775
ENSCSAVG00000010109 Ciona savignyi ENSCSAVG00000010109 I 0.746
LOC100054907 Equus caballus ENSECAG00000013936 I 0.746
SNRNP70 Felis catus ENSFCAG00000006683 I 0.746
SNRNP70 Monodelphis domestica ENSMODG00000023381 I 0.746
SNRNP70 Oryzias latipes ENSORLG00000017158 I 0.732
IGS.gm_29_00073 Chlorella NC64A IGS.gm_29_00073 I 0.732
A9PI24_POPTR Populus trichocarpa POPTR_0005s12580 I 0.718
113249 Helobdella robusta 113249 I 0.711
B9HEV8_POPTR Populus trichocarpa POPTR_0007s12690 I 0.704
Cucsa.127380 Cucumis sativus Cucsa.127380 I 0.704