CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000017915
T37008_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000014555
RRM
102
171
VFCMQLATHIRPWDLEEFFSAIGKVHDVRIIADRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPVT
ENSETEP00000014555
RRM
198
243
CLVGALHFSITEDMLRGISEPFGKMDHVALMRDLETGRSKGYGFIS
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM23
Tarsius syrichta
ENSTSYG00000014755
N
0.810
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.793
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.790
RBM23
Homo sapiens
ENSG00000100461
N
0.790
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.783
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.782
RBM23
Dasypus novemcinctus
ENSDNOG00000002569
N
0.780
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.771
RBM23
Felis catus
ENSFCAG00000006632
N
0.770
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.726