CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF5
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000001521
T38156_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000001393
RRM
6
44
VFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVXX
ENSMEUP00000001393
RRM
119
175
XXXXDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIK
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Srsf5
Dipodomys ordii
ENSDORG00000003989
I
0.807
SRSF5
Pteropus vampyrus
ENSPVAG00000009828
I
0.773
SRSF5
Sorex araneus
ENSSARG00000001059
I
0.750
SRSF5
Gasterosteus aculeatus
ENSGACG00000007834
I
0.700