Srsf5 (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000003989 T36434_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF5
M357_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
985_9037021 		0.706
SRSF5
M356_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
984_9037021 		0.706
SRSF5
M355_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
983_9037021 		0.706
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000003723 RRM 6 62
ENSDORP00000003723 RRM 119 175

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF5 Pteropus vampyrus ENSPVAG00000009828 I 0.924
SRSF5 Sorex araneus ENSSARG00000001059 I 0.883
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.814
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.814
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.814
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.814
LOC100053264 Equus caballus ENSECAG00000026873 I 0.814
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.814
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.814
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.814
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.814
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.814
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.814
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.814
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.814
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.814
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.814
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.814
SRSF5 Homo sapiens ENSG00000100650 D 0.814
SRSF5 Felis catus ENSFCAG00000008848 I 0.814
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.814
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.814
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.814
Srsf5 Mus musculus ENSMUSG00000021134 I 0.814
SRSF5 Gasterosteus aculeatus ENSGACG00000007834 I 0.808
SRSF5 Macropus eugenii ENSMEUG00000001521 N 0.807
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.806
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.806
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.806
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.806
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.806
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.798
SRSF5 Tupaia belangeri ENSTBEG00000001972 I 0.783
Q5ZLF9_CHICK Gallus gallus ENSGALG00000009421 I 0.783
srsf5b Danio rerio ENSDARG00000027734 I 0.752
SRSF5 Ornithorhynchus anatinus ENSOANG00000013336 I 0.752
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.744
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.744
SRSF5 Microcebus murinus ENSMICG00000009661 I 0.721
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.700