CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDBP
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000006053
T38201_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000005534
RRM
269
330
YVSGTDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAIAELNGTKVESVQLK
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDBP
Monodelphis domestica
ENSMODG00000015063
N
0.984
RDBP
Dasypus novemcinctus
ENSDNOG00000009997
N
0.919
Rdbp
Dipodomys ordii
ENSDORG00000011705
N
0.903
LOC100051271
Equus caballus
ENSECAG00000012274
N
0.903
RDBP
Felis catus
ENSFCAG00000004518
N
0.903
ENSDARG00000078711
Danio rerio
ENSDARG00000078711
N
0.903
RDBP
Canis familiaris
ENSCAFG00000000690
N
0.903
A6MKH3_CALJA
Callithrix jacchus
ENSCJAG00000002368
N
0.903
RDBP
Homo sapiens
ENSG00000204356
N
0.903
CR388219.1
Homo sapiens
ENSG00000206268
N
0.903
RDBP
Gorilla gorilla
ENSGGOG00000002265
N
0.903
RDBP
Loxodonta africana
ENSLAFG00000028155
N
0.903
BX005143.2
Homo sapiens
ENSG00000233801
N
0.903
AL662849.4
Homo sapiens
ENSG00000231044
N
0.903
AL844853.7
Homo sapiens
ENSG00000206357
N
0.903
CR759782.5
Homo sapiens
ENSG00000229363
N
0.903
NELFE_BOVIN
Bos taurus
ENSBTAG00000007453
N
0.903
Ame_R018444
Ailuropoda melanoleuca
Ame_R018444
N
0.903
RDBP
Ochotona princeps
ENSOPRG00000003942
N
0.903
RDBP
Procavia capensis
ENSPCAG00000004108
N
0.903
ENSPPYG00000016471
Pongo pygmaeus
ENSPPYG00000016471
N
0.903
RDBP
Oryctolagus cuniculus
ENSOCUG00000007012
N
0.903
Rdbp
Mus musculus
ENSMUSG00000024369
N
0.903
RDBP
Myotis lucifugus
ENSMLUG00000000622
N
0.903
RDBP
Macaca mulatta
ENSMMUG00000000735
N
0.903
RDBP
Pan troglodytes
ENSPTRG00000017996
N
0.903
RDBP
Pteropus vampyrus
ENSPVAG00000005135
N
0.903
RDBP
Sus scrofa
ENSSSCG00000001423
N
0.903
RDBP
Microcebus murinus
ENSMICG00000003287
N
0.903
Rdbp
Rattus norvegicus
ENSRNOG00000000420
N
0.903
RDBP
Tursiops truncatus
ENSTTRG00000005923
N
0.903
RDBP
Cavia porcellus
ENSCPOG00000023834
N
0.887
RDBP
Tarsius syrichta
ENSTSYG00000012132
N
0.871
RDBP
Ornithorhynchus anatinus
ENSOANG00000009900
N
0.839
RDBP
Sorex araneus
ENSSARG00000003684
N
0.839
RDBP
Anolis carolinensis
ENSACAG00000011678
N
0.742