CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
RDBP
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000015063
T39170_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000018834
RRM
209
270
YVSGTDMTPTLLRGAFSPFGNIIDISMDPPRNCAFVTYEKMESADQAIAELNGTKVESVQLK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDBP
Macropus eugenii
ENSMEUG00000006053
N
0.984
RDBP
Dasypus novemcinctus
ENSDNOG00000009997
N
0.903
CR388219.1
Homo sapiens
ENSG00000206268
N
0.887
AL844853.7
Homo sapiens
ENSG00000206357
N
0.887
RDBP
Homo sapiens
ENSG00000204356
N
0.887
CR759782.5
Homo sapiens
ENSG00000229363
N
0.887
Rdbp
Dipodomys ordii
ENSDORG00000011705
N
0.887
LOC100051271
Equus caballus
ENSECAG00000012274
N
0.887
RDBP
Felis catus
ENSFCAG00000004518
N
0.887
AL662849.4
Homo sapiens
ENSG00000231044
N
0.887
RDBP
Myotis lucifugus
ENSMLUG00000000622
N
0.887
RDBP
Macaca mulatta
ENSMMUG00000000735
N
0.887
RDBP
Microcebus murinus
ENSMICG00000003287
N
0.887
RDBP
Loxodonta africana
ENSLAFG00000028155
N
0.887
BX005143.2
Homo sapiens
ENSG00000233801
N
0.887
RDBP
Gorilla gorilla
ENSGGOG00000002265
N
0.887
ENSDARG00000078711
Danio rerio
ENSDARG00000078711
N
0.887
A6MKH3_CALJA
Callithrix jacchus
ENSCJAG00000002368
N
0.887
RDBP
Pan troglodytes
ENSPTRG00000017996
N
0.887
RDBP
Pteropus vampyrus
ENSPVAG00000005135
N
0.887
ENSPPYG00000016471
Pongo pygmaeus
ENSPPYG00000016471
N
0.887
RDBP
Procavia capensis
ENSPCAG00000004108
N
0.887
RDBP
Oryctolagus cuniculus
ENSOCUG00000007012
N
0.887
RDBP
Ochotona princeps
ENSOPRG00000003942
N
0.887
Rdbp
Rattus norvegicus
ENSRNOG00000000420
N
0.887
RDBP
Sus scrofa
ENSSSCG00000001423
N
0.887
RDBP
Canis familiaris
ENSCAFG00000000690
N
0.887
Rdbp
Mus musculus
ENSMUSG00000024369
N
0.887
NELFE_BOVIN
Bos taurus
ENSBTAG00000007453
N
0.887
Ame_R018444
Ailuropoda melanoleuca
Ame_R018444
N
0.887
RDBP
Tursiops truncatus
ENSTTRG00000005923
N
0.887
RDBP
Cavia porcellus
ENSCPOG00000023834
N
0.871
RDBP
Tarsius syrichta
ENSTSYG00000012132
N
0.855
RDBP
Ornithorhynchus anatinus
ENSOANG00000009900
N
0.823
RDBP
Sorex araneus
ENSSARG00000003684
N
0.823
RDBP
Anolis carolinensis
ENSACAG00000011678
N
0.726