CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SREK1
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000005759
T38502_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000005259
RRM
21
55
IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPXX
ENSMICP00000005259
RRM
184
252
VYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLX
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SREK1
Spermophilus tridecemlineatus
ENSSTOG00000008850
N
0.990
SREK1
Tarsius syrichta
ENSTSYG00000000680
N
0.906
SREK1
Echinops telfairi
ENSETEG00000012977
N
0.723
SREK1
Erinaceus europaeus
ENSEEUG00000003430
N
0.723
SREK1
Sus scrofa
ENSSSCG00000016955
N
0.723
Srek1
Mus musculus
ENSMUSG00000032621
N
0.716
LOC100393736
Callithrix jacchus
ENSCJAG00000015950
N
0.716
SFRS12
Macaca mulatta
ENSMMUG00000014586
N
0.716
SREK1
Homo sapiens
ENSG00000153914
N
0.716
SREK1
Loxodonta africana
ENSLAFG00000013853
N
0.716
SREK1
Gorilla gorilla
ENSGGOG00000004737
N
0.716
Ame_R007411
Ailuropoda melanoleuca
Ame_R007411
N
0.716
SREK1
Oryctolagus cuniculus
ENSOCUG00000001319
N
0.716
SREK1
Pteropus vampyrus
ENSPVAG00000009763
N
0.716
SREK1
Pan troglodytes
ENSPTRG00000016936
N
0.716
SREK1
Sorex araneus
ENSSARG00000000795
N
0.716
SREK1
Myotis lucifugus
ENSMLUG00000014801
N
0.716
ENSPPYG00000015515
Pongo pygmaeus
ENSPPYG00000015515
N
0.716
SREK1
Ochotona princeps
ENSOPRG00000012111
N
0.709