SREK1 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000001319 T39596_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000001137 RRM 21 92
ENSOCUP00000001137 RRM 184 252
ENSOCUP00000015897 RRM 35 106
ENSOCUP00000015897 RRM 181 211
ENSOCUP00000023995 RRM 21 92
ENSOCUP00000023995 RRM 187 255

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SREK1 Homo sapiens ENSG00000153914 N 0.993
LOC100393736 Callithrix jacchus ENSCJAG00000015950 N 0.993
SREK1 Gorilla gorilla ENSGGOG00000004737 N 0.993
SREK1 Loxodonta africana ENSLAFG00000013853 N 0.993
Srek1 Mus musculus ENSMUSG00000032621 N 0.993
SFRS12 Macaca mulatta ENSMMUG00000014586 N 0.993
Ame_R007411 Ailuropoda melanoleuca Ame_R007411 N 0.993
SREK1 Pteropus vampyrus ENSPVAG00000009763 N 0.993
SREK1 Sorex araneus ENSSARG00000000795 N 0.993
SREK1 Pan troglodytes ENSPTRG00000016936 N 0.993
ENSPPYG00000015515 Pongo pygmaeus ENSPPYG00000015515 N 0.993
SREK1 Bos taurus ENSBTAG00000007321 N 0.990
SREK1 Cavia porcellus ENSCPOG00000008925 N 0.990
SREK1 Myotis lucifugus ENSMLUG00000014801 N 0.986
SREK1 Ochotona princeps ENSOPRG00000012111 N 0.986
SREK1 Erinaceus europaeus ENSEEUG00000003430 N 0.986
SREK1 Monodelphis domestica ENSMODG00000019665 N 0.981
SREK1 Echinops telfairi ENSETEG00000012977 N 0.979
SREK1 Gallus gallus ENSGALG00000014775 N 0.943
SREK1 Sus scrofa ENSSSCG00000016955 N 0.936
sfrs12 Xenopus tropicalis ENSXETG00000021460 N 0.908
SREK1 Oryzias latipes ENSORLG00000002711 N 0.894
SREK1 Takifugu rubripes ENSTRUG00000002960 N 0.879
SREK1 Tetraodon nigroviridis ENSTNIG00000013463 N 0.872
SREK1 Danio rerio ENSDARG00000009764 N 0.865
SREK1 Choloepus hoffmanni ENSCHOG00000004956 N 0.844
SREK1 Ornithorhynchus anatinus ENSOANG00000005029 N 0.745
estExt_fgenesh2_pg.C_2190052 Branchiostoma floridae estExt_fgenesh2_pg.C_2190052 N 0.730
SREK1 Tursiops truncatus ENSTTRG00000009684 N 0.730
SREK1 Vicugna pacos ENSVPAG00000008654 N 0.730
estExt_fgenesh2_pg.C_2190047 Branchiostoma floridae estExt_fgenesh2_pg.C_2190047 N 0.730
SREK1 Procavia capensis ENSPCAG00000004955 N 0.730
SREK1 Spermophilus tridecemlineatus ENSSTOG00000008850 N 0.723
SREK1 Microcebus murinus ENSMICG00000005759 N 0.716