CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000006201
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000006201
T38665_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000005663
RRM
8
68
LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYEREKHRGFAFVEFELAENESELFGRTI
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PPIE
Loxodonta africana
ENSLAFG00000028312
N
0.761
PPIE
Myotis lucifugus
ENSMLUG00000016233
N
0.761
PPIE
Tursiops truncatus
ENSTTRG00000014385
N
0.761
PPIE
Gorilla gorilla
ENSGGOG00000015783
N
0.761
PPIE
Canis familiaris
ENSCAFG00000003031
N
0.761
LOC100400545
Callithrix jacchus
ENSCJAG00000002589
N
0.761
LOC100054282
Equus caballus
ENSECAG00000024285
N
0.761
LOC100054084
Equus caballus
ENSECAG00000008955
N
0.761
PPIE
Dasypus novemcinctus
ENSDNOG00000002404
N
0.761
PPIE
Sorex araneus
ENSSARG00000005703
N
0.761
PPIE
Sus scrofa
ENSSSCG00000003664
N
0.761
PPIE
Oryctolagus cuniculus
ENSOCUG00000007665
N
0.761
PPIE
Microcebus murinus
ENSMICG00000016676
N
0.761
Ppie
Mus musculus
ENSMUSG00000028651
N
0.761
PPIE
Macaca mulatta
ENSMMUG00000018869
N
0.761
Ppie
Rattus norvegicus
ENSRNOG00000014762
N
0.761
PPIE
Homo sapiens
ENSG00000084072
N
0.761
PPIE
Pan troglodytes
ENSPTRG00000000577
N
0.761
PPIE
Pteropus vampyrus
ENSPVAG00000002120
N
0.761
PPIE
Cavia porcellus
ENSCPOG00000007365
N
0.750
PPIE
Taeniopygia guttata
ENSTGUG00000001276
N
0.746
PPIE
Monodelphis domestica
ENSMODG00000017659
N
0.746
PPIE
Gallus gallus
ENSGALG00000013383
N
0.746
ppie
Danio rerio
ENSDARG00000059270
N
0.732
ENSPPYG00000001501
Pongo pygmaeus
ENSPPYG00000001501
N
0.732
PPIE
Spermophilus tridecemlineatus
ENSSTOG00000010445
N
0.725
PPIE
Erinaceus europaeus
ENSEEUG00000010232
N
0.725
PPIE
Macropus eugenii
ENSMEUG00000005090
N
0.722
Ame_R020475
Ailuropoda melanoleuca
Ame_R020475
N
0.718
PPIE
Ornithorhynchus anatinus
ENSOANG00000010003
N
0.718
PPIE
Oryzias latipes
ENSORLG00000017469
N
0.718
PPIE
Anolis carolinensis
ENSACAG00000002688
N
0.718
PPIE
Felis catus
ENSFCAG00000006027
N
0.718
PPIE
Gasterosteus aculeatus
ENSGACG00000007165
N
0.704