PPIE (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000017469 T40250_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000021843 RRM 8 78

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

88 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.972
PPIE Gallus gallus ENSGALG00000013383 N 0.972
PPIE Monodelphis domestica ENSMODG00000017659 N 0.972
ppie Danio rerio ENSDARG00000059270 N 0.972
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.972
PPIE Anolis carolinensis ENSACAG00000002688 N 0.972
PPIE Canis familiaris ENSCAFG00000003031 N 0.958
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.958
PPIE Loxodonta africana ENSLAFG00000028312 N 0.958
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.958
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.958
LOC100054084 Equus caballus ENSECAG00000008955 N 0.958
PPIE Microcebus murinus ENSMICG00000016676 N 0.958
LOC100054282 Equus caballus ENSECAG00000024285 N 0.958
PPIE Homo sapiens ENSG00000084072 N 0.958
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.958
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.958
PPIE Sorex araneus ENSSARG00000005703 N 0.958
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.958
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.958
PPIE Pan troglodytes ENSPTRG00000000577 N 0.958
PPIE Sus scrofa ENSSSCG00000003664 N 0.958
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.958
Ppie Mus musculus ENSMUSG00000028651 N 0.958
PPIE Macaca mulatta ENSMMUG00000018869 N 0.958
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.958
PPIE Cavia porcellus ENSCPOG00000007365 N 0.944
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.944
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.944
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.930
PPIE Felis catus ENSFCAG00000006027 N 0.915
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.915
AAI23372 Xenopus laevis AAI23372 N 0.915
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.887
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.887
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.887
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.887
PHUM293600 Pediculus humanus PHUM293600 N 0.887
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.873
ISCW002449 Ixodes scapularis ISCW002449 N 0.873
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.859
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.859
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.859
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.845
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.845
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.831
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.831
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.831
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.817
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.817
PPIE Macropus eugenii ENSMEUG00000005090 N 0.806
107863 Helobdella robusta 107863 N 0.803
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.803
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.803
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.803
LOAG_00807 Loa loa LOAG_00807 N 0.803
Bm1_52100 Brugia malayi Bm1_52100 N 0.803
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.789
CBN02296 Caenorhabditis brenneri CBN02296 N 0.789
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.789
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.775
CRE28739 Caenorhabditis remanei CRE28739 N 0.775
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.775
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.761
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.761
CJA08769 Caenorhabditis japonica CJA08769 N 0.761
CBG00420 Caenorhabditis briggsae CBG00420 N 0.761
AGAP009810 Anopheles gambiae AGAP009810 N 0.746
GI20843 Drosophila mojavensis FBgn0143577 N 0.732
GL11464 Drosophila persimilis FBgn0149073 N 0.732
GH20760 Drosophila grimshawi FBgn0128223 N 0.732
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.732
cyp33 Drosophila melanogaster FBgn0028382 N 0.732
GD11288 Drosophila simulans FBgn0183037 N 0.732
GJ20579 Drosophila virilis FBgn0207718 N 0.732
GE11871 Drosophila yakuba FBgn0229657 N 0.732
AAEL013948 Aedes aegypti AAEL013948 N 0.732
GK21899 Drosophila willistoni FBgn0223884 N 0.732
PASA_GEN_6900014 Daphnia pulex PASA_GEN_6900014 N 0.722
GF11346 Drosophila ananassae FBgn0088386 N 0.718
GG21795 Drosophila erecta FBgn0113973 N 0.718
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.718
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.718
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.718
GM21798 Drosophila sechellia FBgn0176676 N 0.718
PPIE Otolemur garnettii ENSOGAG00000003620 N 0.708
Smp_094810 Schistosoma mansoni Smp_094810 N 0.704
SNAPOd2T00024835001 Oikopleura dioica SNAPOd2T00024835001 N 0.704