PPIE (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000007365 T35794_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000006641 RRM 8 79

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Macaca mulatta ENSMMUG00000018869 N 0.986
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.986
PPIE Microcebus murinus ENSMICG00000016676 N 0.986
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.986
Ppie Mus musculus ENSMUSG00000028651 N 0.986
PPIE Sus scrofa ENSSSCG00000003664 N 0.986
PPIE Pan troglodytes ENSPTRG00000000577 N 0.986
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.986
PPIE Sorex araneus ENSSARG00000005703 N 0.986
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.986
PPIE Loxodonta africana ENSLAFG00000028312 N 0.986
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.986
LOC100054282 Equus caballus ENSECAG00000024285 N 0.986
LOC100054084 Equus caballus ENSECAG00000008955 N 0.986
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.986
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.986
PPIE Canis familiaris ENSCAFG00000003031 N 0.986
PPIE Homo sapiens ENSG00000084072 N 0.986
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.986
PPIE Gallus gallus ENSGALG00000013383 N 0.972
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.972
PPIE Monodelphis domestica ENSMODG00000017659 N 0.972
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.958
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.944
PPIE Anolis carolinensis ENSACAG00000002688 N 0.944
PPIE Oryzias latipes ENSORLG00000017469 N 0.944
ppie Danio rerio ENSDARG00000059270 N 0.944
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.944
PPIE Felis catus ENSFCAG00000006027 N 0.944
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.931
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.917
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.917
AAI23372 Xenopus laevis AAI23372 N 0.917
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.903
ISCW002449 Ixodes scapularis ISCW002449 N 0.875
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.861
PHUM293600 Pediculus humanus PHUM293600 N 0.861
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.861
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.861
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.861
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.861
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.861
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.847
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.847
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.833
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.833
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.833
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.833
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.819
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.819
PPIE Macropus eugenii ENSMEUG00000005090 N 0.808
107863 Helobdella robusta 107863 N 0.806
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.792
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.792
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.792
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.792
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.778
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.778
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.778
LOAG_00807 Loa loa LOAG_00807 N 0.778
Bm1_52100 Brugia malayi Bm1_52100 N 0.778
CBN02296 Caenorhabditis brenneri CBN02296 N 0.764
CRE28739 Caenorhabditis remanei CRE28739 N 0.750
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.750
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.750
PPIE Otolemur garnettii ENSOGAG00000003620 N 0.740
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.736
CBG00420 Caenorhabditis briggsae CBG00420 N 0.736
CJA08769 Caenorhabditis japonica CJA08769 N 0.736
AGAP009810 Anopheles gambiae AGAP009810 N 0.722
Smp_094810 Schistosoma mansoni Smp_094810 N 0.722
AAEL013948 Aedes aegypti AAEL013948 N 0.708
GJ20579 Drosophila virilis FBgn0207718 N 0.708
GH20760 Drosophila grimshawi FBgn0128223 N 0.708
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.708
cyp33 Drosophila melanogaster FBgn0028382 N 0.708
GI20843 Drosophila mojavensis FBgn0143577 N 0.708
GL11464 Drosophila persimilis FBgn0149073 N 0.708
GE11871 Drosophila yakuba FBgn0229657 N 0.708
GK21899 Drosophila willistoni FBgn0223884 N 0.708
GD11288 Drosophila simulans FBgn0183037 N 0.708
SNAPOd2T00024835001 Oikopleura dioica SNAPOd2T00024835001 N 0.708