ENSPPYG00000001501 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000001501 T40436_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000001734 RRM 1 67
ENSPPYP00000001735 RRM 8 78

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.985
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.972
PPIE Loxodonta africana ENSLAFG00000028312 N 0.972
PPIE Macaca mulatta ENSMMUG00000018869 N 0.972
Ppie Mus musculus ENSMUSG00000028651 N 0.972
PPIE Microcebus murinus ENSMICG00000016676 N 0.972
PPIE Homo sapiens ENSG00000084072 N 0.972
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.972
PPIE Canis familiaris ENSCAFG00000003031 N 0.972
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.972
LOC100054084 Equus caballus ENSECAG00000008955 N 0.972
LOC100054282 Equus caballus ENSECAG00000024285 N 0.972
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.972
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.972
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.972
PPIE Sus scrofa ENSSSCG00000003664 N 0.972
PPIE Sorex araneus ENSSARG00000005703 N 0.972
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.972
PPIE Pan troglodytes ENSPTRG00000000577 N 0.972
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.972
PPIE Cavia porcellus ENSCPOG00000007365 N 0.958
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.958
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.958
PPIE Gallus gallus ENSGALG00000013383 N 0.958
PPIE Monodelphis domestica ENSMODG00000017659 N 0.958
PPIE Anolis carolinensis ENSACAG00000002688 N 0.930
PPIE Felis catus ENSFCAG00000006027 N 0.930
ppie Danio rerio ENSDARG00000059270 N 0.930
PPIE Oryzias latipes ENSORLG00000017469 N 0.930
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.915
AAI23372 Xenopus laevis AAI23372 N 0.915
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.915
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.915
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.887
PHUM293600 Pediculus humanus PHUM293600 N 0.873
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.873
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.873
ISCW002449 Ixodes scapularis ISCW002449 N 0.859
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.845
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.845
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.845
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.845
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.845
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.845
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.845
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.824
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.817
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.817
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.817
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.817
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.817
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.803
PPIE Otolemur garnettii ENSOGAG00000003620 N 0.794
PPIE Macropus eugenii ENSMEUG00000005090 N 0.792
107863 Helobdella robusta 107863 N 0.789
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.775
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.775
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.761
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.761
LOAG_00807 Loa loa LOAG_00807 N 0.761
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.761
Bm1_52100 Brugia malayi Bm1_52100 N 0.761
CBN02296 Caenorhabditis brenneri CBN02296 N 0.746
CRE28739 Caenorhabditis remanei CRE28739 N 0.732
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.732
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.732
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.718
Sjc_0059010 Schistosoma japonicum Sjc_0059010 N 0.718
CJA08769 Caenorhabditis japonica CJA08769 N 0.718
CBG00420 Caenorhabditis briggsae CBG00420 N 0.718
AGAP009810 Anopheles gambiae AGAP009810 N 0.704
Smp_094810 Schistosoma mansoni Smp_094810 N 0.704
estExt_Genewise1.C_2490001 Capitella teleta estExt_Genewise1.C_2490001 N 0.701