CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMLUG00000014547
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000014547
T38758_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000013238
RRM
387
452
LLAKNLPYKVTQDELKEVFEDAMEIRLVSKDGKSKGIAYIEFKTEADAEKTLEEKQGTEIDGRSIS
ENSMLUP00000013238
RRM
480
546
LVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIR
ENSMLUP00000013238
RRM
566
633
LFVKGLSEETTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCL
Homo sapiens
ENSG00000115053
D
0.960
NCL
Dasypus novemcinctus
ENSDNOG00000010783
N
0.900
LOC100395223
Callithrix jacchus
ENSCJAG00000013538
I
0.841
NCL
Pan troglodytes
ENSPTRG00000013025
I
0.841
NCL
Macaca mulatta
ENSMMUG00000018094
I
0.816