NCL (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000018094 T38955_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000006685 RRM 206 274
ENSMMUP00000006685 RRM 292 357
ENSMMUP00000006685 RRM 385 451
ENSMMUP00000006685 RRM 471 538
ENSMMUP00000023783 RRM 287 355
ENSMMUP00000023783 RRM 373 438
ENSMMUP00000023783 RRM 466 532
ENSMMUP00000023783 RRM 552 619
ENSMMUP00000023785 RRM 310 378
ENSMMUP00000023785 RRM 396 461
ENSMMUP00000023785 RRM 489 555
ENSMMUP00000023785 RRM 575 642
ENSMMUP00000023786 RRM 199 238
ENSMMUP00000023786 RRM 266 332
ENSMMUP00000023786 RRM 352 419

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCL Homo sapiens ENSG00000115053 D 1.000
NCL Pan troglodytes ENSPTRG00000013025 I 1.000
NCL Gorilla gorilla ENSGGOG00000004300 I 1.000
LOC100395223 Callithrix jacchus ENSCJAG00000013538 I 0.996
NCL Pteropus vampyrus ENSPVAG00000000297 I 0.981
NCL Canis familiaris ENSCAFG00000011037 I 0.981
NCL Tarsius syrichta ENSTSYG00000004355 I 0.981
NCL Oryctolagus cuniculus ENSOCUG00000004312 I 0.978
NCL Bos taurus ENSBTAG00000016174 I 0.974
Ame_R005385 Ailuropoda melanoleuca Ame_R005385 I 0.974
Q6X9Z0_HORSE Equus caballus ENSECAG00000021868 I 0.970
NCL Tursiops truncatus ENSTTRG00000009094 I 0.967
NCL Microcebus murinus ENSMICG00000002538 I 0.959
ENSBTAG00000026909 Bos taurus ENSBTAG00000026909 I 0.956
NCL Erinaceus europaeus ENSEEUG00000005913 I 0.926
ENSETEG00000014756 Echinops telfairi ENSETEG00000014756 I 0.922
ENSETEG00000018937 Echinops telfairi ENSETEG00000018937 I 0.922
Ncl Rattus norvegicus ENSRNOG00000018273 I 0.889
Ncl Mus musculus ENSMUSG00000026234 I 0.885
ENSRNOG00000008664 Rattus norvegicus ENSRNOG00000008664 I 0.885
ENSPPYG00000013265 Pongo pygmaeus ENSPPYG00000013265 I 0.867
Ncl Dipodomys ordii ENSDORG00000012513 I 0.863
NCL Cavia porcellus ENSCPOG00000001034 I 0.856
ENSSSCG00000016275 Sus scrofa ENSSSCG00000016275 I 0.841
NCL Loxodonta africana ENSLAFG00000013061 I 0.830
ENSTBEG00000001546 Tupaia belangeri ENSTBEG00000001546 I 0.826
NCL Vicugna pacos ENSVPAG00000001796 I 0.826
NCL Macropus eugenii ENSMEUG00000012335 I 0.819
ENSMLUG00000014547 Myotis lucifugus ENSMLUG00000014547 N 0.816
NCL Monodelphis domestica ENSMODG00000002470 I 0.815
ENSTBEG00000002469 Tupaia belangeri ENSTBEG00000002469 I 0.811
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.808
NCL Dasypus novemcinctus ENSDNOG00000010783 N 0.800
NCL Choloepus hoffmanni ENSCHOG00000012860 I 0.752
NCL Sorex araneus ENSSARG00000010007 I 0.737
ENSGGOG00000022986 Gorilla gorilla ENSGGOG00000022986 I 0.715
NUCL_CHICK Gallus gallus ENSGALG00000007705 I 0.708
NCL Meleagris gallopavo ENSMGAG00000008147 I 0.701