CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOANG00000011381
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000011381
T39538_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000018037
RRM
62
126
LFVGNLPTDISEENFKCLFQRYGRPREIFISRDRGFSFVRQQCRALAHIAKAELDGTFLRTKPLR
ENSOANP00000018037
RRM
136
200
LRVRNLSPVVSIELLEQAFSRFGPVEKAVVLVDERGRASGKGLVEFATKTVARRALERCAHGAFL
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PSPC1
Loxodonta africana
ENSLAFG00000010968
I
0.746
PSPC1
Homo sapiens
ENSG00000121390
I
0.746
PSPC1
Cavia porcellus
ENSCPOG00000000395
I
0.746
PSPC1
Oryctolagus cuniculus
ENSOCUG00000006153
I
0.746
PSPC1
Macropus eugenii
ENSMEUG00000000476
I
0.746
PSPC1
Myotis lucifugus
ENSMLUG00000017663
I
0.746
Pspc1
Mus musculus
ENSMUSG00000021938
I
0.746
PSPC1
Monodelphis domestica
ENSMODG00000008029
I
0.746
PSPC1
Macaca mulatta
ENSMMUG00000020262
I
0.746
PSPC1
Choloepus hoffmanni
ENSCHOG00000008913
I
0.746
PSPC1
Callithrix jacchus
ENSCJAG00000004554
I
0.746
PSPC1
Pan troglodytes
ENSPTRG00000005677
I
0.746
PSPC1
Sorex araneus
ENSSARG00000000888
I
0.746
Ame_R014248
Ailuropoda melanoleuca
Ame_R014248
I
0.746
Pspc1
Rattus norvegicus
ENSRNOG00000020782
I
0.746
ENSPPYG00000005186
Pongo pygmaeus
ENSPPYG00000005186
I
0.746
PSPC1_BOVIN
Bos taurus
ENSBTAG00000003934
I
0.738
Pspc1
Dipodomys ordii
ENSDORG00000016050
I
0.738
PSPC1
Tursiops truncatus
ENSTTRG00000003343
I
0.738
PSPC1
Sus scrofa
ENSSSCG00000009569
I
0.738
PSPC1
Pteropus vampyrus
ENSPVAG00000005036
I
0.738
PSPC1
Gorilla gorilla
ENSGGOG00000003414
I
0.735
PSPC1
Taeniopygia guttata
ENSTGUG00000011295
I
0.733
PSPC1
Anolis carolinensis
ENSACAG00000002093
I
0.733
PSPC1_CHICK
Gallus gallus
ENSGALG00000017142
I
0.733
PSPC1
Erinaceus europaeus
ENSEEUG00000011288
I
0.731
PSPC1
Felis catus
ENSFCAG00000013701
I
0.715
PSPC1
Dasypus novemcinctus
ENSDNOG00000011078
N
0.715