PSPC1 (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000003414 T37768_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.752
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000003356 RRM 84 148
ENSGGOP00000003356 RRM 158 224

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.985
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.985
PSPC1 Sorex araneus ENSSARG00000000888 I 0.985
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.985
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.985
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.985
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.985
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.985
Pspc1 Mus musculus ENSMUSG00000021938 I 0.985
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.985
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.985
PSPC1 Homo sapiens ENSG00000121390 I 0.985
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.985
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.985
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.985
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.985
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.977
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.977
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.977
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.977
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.977
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.977
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.977
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.977
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.970
PSPC1 Felis catus ENSFCAG00000013701 I 0.955
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 N 0.924
PSPC1 Canis familiaris ENSCAFG00000007365 N 0.886
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.780
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.773
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.773
pspc1 Danio rerio ENSDARG00000006621 N 0.773
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.773
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.767
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.759
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.759
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.758
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.752
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.752
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.752
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.752
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.752
LOC100069588 Equus caballus ENSECAG00000000642 I 0.752
SFPQ Homo sapiens ENSG00000116560 D 0.752
SFPQ Bos taurus ENSBTAG00000016328 I 0.752
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.752
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.752
SFPQ Microcebus murinus ENSMICG00000011755 I 0.752
SFPQ Procavia capensis ENSPCAG00000006164 I 0.752
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.752
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.752
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.752
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.752
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.752
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.752
SFPQ Echinops telfairi ENSETEG00000001095 I 0.752
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.752
Sfpq Mus musculus ENSMUSG00000028820 I 0.752
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.752
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.744
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.742
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.737
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.735
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.735
ENSOANG00000011381 Ornithorhynchus anatinus ENSOANG00000011381 N 0.735
PSPC1 Oryzias latipes ENSORLG00000004232 N 0.727
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.720
nono Danio rerio ENSDARG00000020482 I 0.712
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.707
PSPC1 Tetraodon nigroviridis ENSTNIG00000010358 N 0.705
PSPC1 Takifugu rubripes ENSTRUG00000011335 N 0.705
sfpq Danio rerio ENSDARG00000011564 I 0.705
PSPC1 Gasterosteus aculeatus ENSGACG00000014901 N 0.705