PSPC1 (Felis catus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSFCAG00000013701 T37136_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.714
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSFCAP00000012708 RRM 78 142
ENSFCAP00000012708 RRM 152 215

Links

Other RRM family RBPs
Other Felis catus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.969
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.969
Pspc1 Mus musculus ENSMUSG00000021938 I 0.969
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.969
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.969
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.969
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.969
PSPC1 Sorex araneus ENSSARG00000000888 I 0.969
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.969
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.969
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.969
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.969
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.969
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.969
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.969
PSPC1 Homo sapiens ENSG00000121390 I 0.969
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.969
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.962
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.962
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.962
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.962
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.962
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.955
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.947
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.947
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.947
PSPC1 Dasypus novemcinctus ENSDNOG00000011078 N 0.908
PSPC1 Canis familiaris ENSCAFG00000007365 N 0.877
pspc1 Danio rerio ENSDARG00000006621 N 0.767
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.748
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.740
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.735
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.735
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.733
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.722
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.722
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.722
ENSOANG00000011381 Ornithorhynchus anatinus ENSOANG00000011381 N 0.715
SFPQ Bos taurus ENSBTAG00000016328 I 0.714
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.714
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.714
SFPQ Echinops telfairi ENSETEG00000001095 I 0.714
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.714
LOC100069588 Equus caballus ENSECAG00000000642 I 0.714
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.714
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.714
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.714
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.714
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.714
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.714
SFPQ Microcebus murinus ENSMICG00000011755 I 0.714
SFPQ Procavia capensis ENSPCAG00000006164 I 0.714
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.714
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.714
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.714
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.714
SFPQ Homo sapiens ENSG00000116560 D 0.714
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.714
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.714
Sfpq Mus musculus ENSMUSG00000028820 I 0.714
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.710
PSPC1 Oryzias latipes ENSORLG00000004232 N 0.708
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.707
nono Danio rerio ENSDARG00000020482 I 0.705