CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBFOX2
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000001081
T41267_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000000998
RRM
139
188
XXQFGKILDVEIIFNERGSKGFGFVTFENSDADRARENGHGTVVEGRKIE
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBFOX1
Tarsius syrichta
ENSTSYG00000005334
I
0.941
RBFOX2
Microcebus murinus
ENSMICG00000014135
I
0.941
RBFOX1
Echinops telfairi
ENSETEG00000003771
N
0.922
a2bp1
Xenopus tropicalis
ENSXETG00000005126
I
0.902
ENSPPYG00000011766
Pongo pygmaeus
ENSPPYG00000011766
I
0.902
ENSPPYG00000007079
Pongo pygmaeus
ENSPPYG00000007079
I
0.902
RBFOX3
Otolemur garnettii
ENSOGAG00000015319
N
0.863
Rbfox3
Mus musculus
ENSMUSG00000025576
I
0.827
ENSTRUG00000002748
Takifugu rubripes
ENSTRUG00000002748
I
0.808
rbfox2
Danio rerio
ENSDARG00000052182
N
0.808
RBFOX2
Pteropus vampyrus
ENSPVAG00000015844
N
0.784
ENSMEUG00000004218
Macropus eugenii
ENSMEUG00000004218
N
0.706
RBFOX2
Macropus eugenii
ENSMEUG00000001547
I
0.706