CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRNAU1AP
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000008049
T41738_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000006965
RRM
2
33
PAGYCFVEFADLATAEKCLHKINGKPLPGATP
ENSTBEP00000006965
RRM
56
126
LFVGDLTPDVDDGVLYEFFVKVYPSCGGKVILDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVR
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRNAU1AP
Echinops telfairi
ENSETEG00000012594
N
0.952
TRNAU1AP
Spermophilus tridecemlineatus
ENSSTOG00000000079
N
0.943
Ame_R001126
Ailuropoda melanoleuca
Ame_R001126
N
0.942
TRNAU1AP
Vicugna pacos
ENSVPAG00000006778
N
0.934
TRNAU1AP
Dasypus novemcinctus
ENSDNOG00000010065
N
0.934
Trnau1ap
Dipodomys ordii
ENSDORG00000006349
N
0.925
TRNAU1AP
Otolemur garnettii
ENSOGAG00000002274
N
0.727
TRNAU1AP
Taeniopygia guttata
ENSTGUG00000000735
N
0.725
TRNAU1AP
Microcebus murinus
ENSMICG00000008386
N
0.717
TRNAU1AP
Sorex araneus
ENSSARG00000007536
N
0.710