CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRNAU1AP
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000000735
T41836_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000000751
RRM
1
66
LEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATP
ENSTGUP00000000751
RRM
89
160
LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVR
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRNAU1AP
Meleagris gallopavo
ENSMGAG00000002105
N
0.971
TRNAU1AP
Microcebus murinus
ENSMICG00000008386
N
0.971
TRSPAP1
Gallus gallus
ENSGALG00000001310
N
0.958
TRNAU1AP
Sorex araneus
ENSSARG00000007536
N
0.957
TRNAU1AP
Macropus eugenii
ENSMEUG00000006117
N
0.950
TRNAU1AP
Loxodonta africana
ENSLAFG00000007628
N
0.937
TRNAU1AP
Homo sapiens
ENSG00000180098
N
0.937
TRNAU1AP
Tursiops truncatus
ENSTTRG00000001854
N
0.937
TRNAU1AP
Pteropus vampyrus
ENSPVAG00000017214
N
0.937
LOC100070713
Equus caballus
ENSECAG00000012980
N
0.937
TRNAU1AP
Gorilla gorilla
ENSGGOG00000003511
N
0.937
TRNAU1AP
Cavia porcellus
ENSCPOG00000001925
N
0.937
LOC100399818
Callithrix jacchus
ENSCJAG00000009717
N
0.937
TRNAU1AP
Canis familiaris
ENSCAFG00000011735
N
0.937
TRNAU1AP
Monodelphis domestica
ENSMODG00000010927
N
0.930
TSAP1_BOVIN
Bos taurus
ENSBTAG00000010393
N
0.930
TRNAU1AP
Myotis lucifugus
ENSMLUG00000012586
N
0.930
TRNAU1AP
Tarsius syrichta
ENSTSYG00000003506
N
0.930
TRNAU1AP
Felis catus
ENSFCAG00000013401
N
0.930
ENSOCUG00000011704
Oryctolagus cuniculus
ENSOCUG00000011704
N
0.910
Trnau1ap
Mus musculus
ENSMUSG00000028898
N
0.909
ENSOCUG00000002353
Oryctolagus cuniculus
ENSOCUG00000002353
N
0.826
TRNAU1AP
Otolemur garnettii
ENSOGAG00000002274
N
0.777
TRNAU1AP
Vicugna pacos
ENSVPAG00000006778
N
0.754
TRNAU1AP
Dasypus novemcinctus
ENSDNOG00000010065
N
0.754
Trnau1ap
Dipodomys ordii
ENSDORG00000006349
N
0.748
TRNAU1AP
Echinops telfairi
ENSETEG00000012594
N
0.746
TRNAU1AP
Spermophilus tridecemlineatus
ENSSTOG00000000079
N
0.741
Ame_R001126
Ailuropoda melanoleuca
Ame_R001126
N
0.739
TRNAU1AP
Tupaia belangeri
ENSTBEG00000008049
N
0.725
TRNAU1AP
Takifugu rubripes
ENSTRUG00000003352
N
0.708