CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SART3
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000006905
T41918_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
SART3
M062_0.6
Homo sapiens
ARAAAAM
RNAcompete
Ray et al.(2013)
RNCMPT00064
0.759
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000007134
RRM
632
702
VFVSNLSYTMAEPEAKLRELFGSCGEVVEIRAVFNNKGTFRGYCYVQFREEEAARQALALDRTAVEGRPMF
ENSTGUP00000007134
RRM
729
798
LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKGLAYVEYESEAQASQAVLKMDGLTMKDHVIK
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SART3
Meleagris gallopavo
ENSMGAG00000005746
I
0.823
LOC777582
Gallus gallus
ENSGALG00000004887
I
0.816
SART3
Canis familiaris
ENSCAFG00000011352
I
0.787
SART3
Tupaia belangeri
ENSTBEG00000008888
I
0.787
SART3
Pteropus vampyrus
ENSPVAG00000007442
I
0.780
SART3
Felis catus
ENSFCAG00000014041
I
0.780
Ame_R009455
Ailuropoda melanoleuca
Ame_R009455
I
0.780
ENSPPYG00000004919
Pongo pygmaeus
ENSPPYG00000004919
I
0.773
Sart3
Rattus norvegicus
ENSRNOG00000000702
I
0.773
SART3
Cavia porcellus
ENSCPOG00000010969
I
0.773
A7MB01_BOVIN
Bos taurus
ENSBTAG00000031846
I
0.773
SART3
Macaca mulatta
ENSMMUG00000017124
I
0.766
SART3
Oryctolagus cuniculus
ENSOCUG00000016285
I
0.766
SART3
Procavia capensis
ENSPCAG00000007505
I
0.766
SART3
Microcebus murinus
ENSMICG00000013052
I
0.766
SART3
Gorilla gorilla
ENSGGOG00000011562
I
0.766
SART3
Pan troglodytes
ENSPTRG00000005404
I
0.766
Q4KU45_HORSE
Equus caballus
ENSECAG00000000314
I
0.766
SART3
Erinaceus europaeus
ENSEEUG00000002954
I
0.766
SART3
Ornithorhynchus anatinus
ENSOANG00000008794
I
0.759
SART3
Sus scrofa
ENSSSCG00000009946
I
0.759
SART3
Macropus eugenii
ENSMEUG00000006799
I
0.759
SART3
Homo sapiens
ENSG00000075856
D
0.759
SART3
Callithrix jacchus
ENSCJAG00000015330
I
0.759
Sart3
Mus musculus
ENSMUSG00000018974
I
0.759
SART3
Loxodonta africana
ENSLAFG00000007167
I
0.759
SART3
Monodelphis domestica
ENSMODG00000002859
I
0.759
SART3
Tursiops truncatus
ENSTTRG00000003993
I
0.752
SART3
Spermophilus tridecemlineatus
ENSSTOG00000002376
I
0.752
SART3
Echinops telfairi
ENSETEG00000011292
I
0.738
SART3
Ochotona princeps
ENSOPRG00000015817
I
0.723
SART3
Anolis carolinensis
ENSACAG00000001176
N
0.702