snrpa (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000002585 T42827_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000005513 RRM 12 58
ENSXETP00000005513 RRM 211 276

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Gm5145 Mus musculus ENSMUSG00000071273 I 0.792
P45429 Xenopus laevis P45429 I 0.732
CAA41021 Xenopus laevis CAA41021 I 0.732
AAH44979 Xenopus laevis AAH44979 I 0.732
snrpa Danio rerio ENSDARG00000018890 I 0.717
SNRPA Takifugu rubripes ENSTRUG00000009703 I 0.710
SNRPA Procavia capensis ENSPCAG00000012325 I 0.710
ENSPPYG00000010002 Pongo pygmaeus ENSPPYG00000010002 I 0.703
SNRPA Pan troglodytes ENSPTRG00000011007 I 0.703
SNRPA Otolemur garnettii ENSOGAG00000002864 I 0.703
SNRPA Ochotona princeps ENSOPRG00000002364 I 0.703
Snrpa Rattus norvegicus ENSRNOG00000001501 I 0.703
SNRPA Tetraodon nigroviridis ENSTNIG00000007732 I 0.703
SNRPA Tupaia belangeri ENSTBEG00000012717 I 0.703
SNRPA Sus scrofa ENSSSCG00000002998 I 0.703
Snrpa Mus musculus ENSMUSG00000061479 I 0.703
SNRPA Pteropus vampyrus ENSPVAG00000001494 I 0.703
SNRPA Myotis lucifugus ENSMLUG00000000219 I 0.703
LOC100410790 Callithrix jacchus ENSCJAG00000021962 I 0.703
SNRPA Cavia porcellus ENSCPOG00000010875 I 0.703
SNRPA Canis familiaris ENSCAFG00000005091 I 0.703
SNRPA_BOVIN Bos taurus ENSBTAG00000009077 I 0.703
SNRPA Anolis carolinensis ENSACAG00000013557 I 0.703
ENSDORG00000006711 Dipodomys ordii ENSDORG00000006711 I 0.703
LOC100068274 Equus caballus ENSECAG00000013141 I 0.703
Ame_R012098 Ailuropoda melanoleuca Ame_R012098 I 0.703
SNRPA Macaca mulatta ENSMMUG00000022024 I 0.703
SNRPA Gorilla gorilla ENSGGOG00000001190 I 0.703
SNRPA Homo sapiens ENSG00000077312 D 0.703
SNRPA Felis catus ENSFCAG00000016209 I 0.703
SNRPA Monodelphis domestica ENSMODG00000007912 I 0.703