ENSXETG00000027221 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000027221 T42966_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000056914 RRM 13 83
ENSXETP00000056914 RRM 101 168

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCSAVG00000003102 Ciona savignyi ENSCSAVG00000003102 I 0.806
ENSPVAG00000016117 Pteropus vampyrus ENSPVAG00000016117 N 0.793
ENSOCUG00000002565 Oryctolagus cuniculus ENSOCUG00000002565 N 0.786
ENSMMUG00000009740 Macaca mulatta ENSMMUG00000009740 N 0.786
ENSMICG00000006481 Microcebus murinus ENSMICG00000006481 N 0.786
ENSPCAG00000005308 Procavia capensis ENSPCAG00000005308 N 0.786
ENSPPYG00000020468 Pongo pygmaeus ENSPPYG00000020468 N 0.786
ENSSSCG00000012413 Sus scrofa ENSSSCG00000012413 N 0.786
ENSTTRG00000013181 Tursiops truncatus ENSTTRG00000013181 N 0.786
PABPC1L2B Gorilla gorilla ENSGGOG00000024868 N 0.786
ENSSTOG00000010638 Spermophilus tridecemlineatus ENSSTOG00000010638 N 0.786
PABPC1L2A Gorilla gorilla ENSGGOG00000009169 N 0.786
ENSCPOG00000009525 Cavia porcellus ENSCPOG00000009525 N 0.786
ENSDORG00000011362 Dipodomys ordii ENSDORG00000011362 N 0.786
PABPC1L2B Homo sapiens ENSG00000184388 N 0.786
Ame_R020689 Ailuropoda melanoleuca Ame_R020689 N 0.786
PABPC1L2A Homo sapiens ENSG00000186288 N 0.786
ENSDNOG00000011788 Dasypus novemcinctus ENSDNOG00000011788 N 0.779
ENSMLUG00000003619 Myotis lucifugus ENSMLUG00000003619 N 0.779
LOC100146775 Equus caballus ENSECAG00000002620 N 0.779
WUBG_09254 Wuchereria bancrofti WUBG_09254 N 0.779
ENSLAFG00000023096 Loxodonta africana ENSLAFG00000023096 N 0.771
Pabpc1l2b Rattus norvegicus ENSRNOG00000022267 N 0.764
ENSEEUG00000008203 Erinaceus europaeus ENSEEUG00000008203 N 0.736
Ame_R005773 Ailuropoda melanoleuca Ame_R005773 N 0.736
PABPC4 Homo sapiens ENSG00000090621 D 0.712