GI23736 (Drosophila mojavensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0146461 T43666_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Rbp1-like
M121_0.6 		Drosophila melanogaster AUCADCR RNAcompete
Ray et al.(2013)
RNCMPT00127 		0.955
Rbp1
M336_0.6 		Drosophila melanogaster Sequence logo not available AUCYNNA SELEX
Cook et al.(2011)
804_7664738.1 		0.924
Rbp1
M335_0.6 		Drosophila melanogaster Sequence logo not available DCADCUUUA SELEX
Cook et al.(2011)
804_7664738 		0.924
Rbp1
M056_0.6 		Drosophila melanogaster WCAACRR RNAcompete
Ray et al.(2013)
RNCMPT00058 		0.924
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0172953 RRM 13 78

Links

Other RRM family RBPs
Other Drosophila mojavensis RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GK13897 Drosophila willistoni FBgn0215904 I 0.985
GG19507 Drosophila erecta FBgn0111709 I 0.955
GH24472 Drosophila grimshawi FBgn0131928 I 0.955
GF19500 Drosophila ananassae FBgn0096507 I 0.955
GL26725 Drosophila persimilis FBgn0164306 I 0.955
GA15173-RA Drosophila pseudoobscura FBgn0075198 I 0.955
GF17902 Drosophila ananassae FBgn0094920 I 0.955
Rbp1-like Drosophila melanogaster FBgn0030479 D 0.955
GI15337 Drosophila mojavensis FBgn0138086 I 0.955
GE16161 Drosophila yakuba FBgn0233705 I 0.955
GJ10582 Drosophila virilis FBgn0197862 I 0.955
GK16401 Drosophila willistoni FBgn0218403 I 0.955
GJ14774 Drosophila virilis FBgn0201978 I 0.939
GM23896 Drosophila sechellia FBgn0178761 I 0.924
GG17683 Drosophila erecta FBgn0109905 I 0.924
GD18708 Drosophila simulans FBgn0190229 I 0.924
GE26048 Drosophila yakuba FBgn0243090 I 0.924
Rbp1 Drosophila melanogaster FBgn0260944 D 0.924
AGAP007325 Anopheles gambiae AGAP007325 I 0.879
nasonia_NCBI_hmm78264 Nasonia vitripennis nasonia_NCBI_hmm78264 I 0.879
AAEL001356 Aedes aegypti AAEL001356 I 0.879
amel4_ncbi_hmm63829 Apis mellifera amel4_ncbi_hmm63829 I 0.864
PHUM357390 Pediculus humanus PHUM357390 I 0.864
CpipJ_CPIJ003074 Culex pipiens CpipJ_CPIJ003074 I 0.864
amel4_ncbi_hmm65494 Apis mellifera amel4_ncbi_hmm65494 I 0.864
CPIJ003074 Culex quinquefasciatus CPIJ003074 I 0.864
PHUM565080 Pediculus humanus PHUM565080 I 0.773
PASA_GEN_2500115 Daphnia pulex PASA_GEN_2500115 I 0.773
nasonia_NCBI_hmm124154 Nasonia vitripennis nasonia_NCBI_hmm124154 I 0.758
ENSCING00000011663 Ciona intestinalis ENSCING00000011663 I 0.742
ENSCSAVG00000002676 Ciona savignyi ENSCSAVG00000002676 I 0.712
e_gw1.25.498.1 Lottia gigantea e_gw1.25.498.1 N 0.712