CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL23650
(
Drosophila persimilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0161240
T43760_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0187757
RRM
71
120
LSRERDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIR
FBpp0187757
RRM
163
224
GALSGFLNEDILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVK
Links
Other
RRM
family RBPs
Other
Drosophila persimilis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GG11590
Drosophila erecta
FBgn0103887
N
0.956
GH17442
Drosophila grimshawi
FBgn0124912
N
0.955
GK22643
Drosophila willistoni
FBgn0224620
N
0.955
GM16372
Drosophila sechellia
FBgn0171287
N
0.955
GF18877
Drosophila ananassae
FBgn0095891
N
0.946
GI22767
Drosophila mojavensis
FBgn0145494
N
0.921
GD21365
Drosophila simulans
FBgn0192802
N
0.797
GJ22770
Drosophila virilis
FBgn0209874
N
0.797
CG34354
Drosophila melanogaster
FBgn0085383
N
0.797
AGAP005292
Anopheles gambiae
AGAP005292
N
0.722