CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP005292
(
Anopheles gambiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AGAP005292
T32509_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP005292-PA
RRM
82
152
IFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAIAAMNGQWLGSRSIR
AGAP005292-PA
RRM
195
256
GTLAGGLNEDILQKTFSPFGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVHNSEINSQTVK
Links
Other
RRM
family RBPs
Other
Anopheles gambiae
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG34354
Drosophila melanogaster
FBgn0085383
N
0.872
GD21365
Drosophila simulans
FBgn0192802
N
0.872
GJ22770
Drosophila virilis
FBgn0209874
N
0.872
PHUM511750
Pediculus humanus
PHUM511750
N
0.787
GM16370
Drosophila sechellia
FBgn0171285
N
0.784
GD21364
Drosophila simulans
FBgn0192801
N
0.784
GE23777
Drosophila yakuba
FBgn0240933
N
0.784
GJ22768
Drosophila virilis
FBgn0209872
N
0.784
GI22766
Drosophila mojavensis
FBgn0145493
N
0.784
GG11588
Drosophila erecta
FBgn0103885
N
0.784
GF18875
Drosophila ananassae
FBgn0095889
N
0.784
GK22641
Drosophila willistoni
FBgn0224618
N
0.784
GH17439
Drosophila grimshawi
FBgn0124909
N
0.784
CG34362
Drosophila melanogaster
FBgn0085391
N
0.784
GL23648
Drosophila persimilis
FBgn0161238
N
0.777
GA26680-RA
Drosophila pseudoobscura
FBgn0248053
N
0.777
DGIL_AUG5s2018g1t1
Acyrtosiphon pisum
DGIL_AUG5s2018g1t1
N
0.750
GK22643
Drosophila willistoni
FBgn0224620
N
0.722
GL23650
Drosophila persimilis
FBgn0161240
N
0.722
GF18877
Drosophila ananassae
FBgn0095891
N
0.714
GG11590
Drosophila erecta
FBgn0103887
N
0.714
GH17442
Drosophila grimshawi
FBgn0124912
N
0.714
GI22767
Drosophila mojavensis
FBgn0145494
N
0.714
GM16372
Drosophila sechellia
FBgn0171287
N
0.714