XM_002883237.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.3__2330__AT3G21100.2 T44522_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2330__AT3G21100.2 RRM 331 391

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G21100 Arabidopsis thaliana AT3G21100-TAIR-G N 0.967
XM_002891597.1 Arabidopsis lyrata fgenesh2_kg.1__4219__AT1G51520.1 N 0.836
Cucsa.333940 Cucumis sativus Cucsa.333940 N 0.820
mgf013141m Mimulus guttatus mgf013141m N 0.803
AT1G51520 Arabidopsis thaliana AT1G51520-TAIR-G N 0.803
GRMZM2G003424 Zea mays GRMZM2G003424 N 0.787
AT3G63450 Arabidopsis thaliana AT3G63450-TAIR-G N 0.770
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.770
Cucsa.067590 Cucumis sativus Cucsa.067590 N 0.754
PK28383.1 Cannabis sativa PK28383.1 N 0.754
cassava2293.valid.m1 Manihot esculenta cassava2293.valid.m1 N 0.754
GSVIVG00030048001 Vitis vinifera GSVIVG00030048001 N 0.754
MDP0000214823 Malus x domestica MDP0000214823 N 0.738