Cucsa.067590 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.067590 T49535_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.067590.1 RRM 328 386
Cucsa.067590.4 RRM 328 386

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK28383.1 Cannabis sativa PK28383.1 N 0.885
GRMZM2G003424 Zea mays GRMZM2G003424 N 0.852
GRMZM2G044004 Zea mays GRMZM2G044004 N 0.836
mgf013141m Mimulus guttatus mgf013141m N 0.836
AT3G63450 Arabidopsis thaliana AT3G63450-TAIR-G N 0.833
Cucsa.333940 Cucumis sativus Cucsa.333940 N 0.820
cassava2293.valid.m1 Manihot esculenta cassava2293.valid.m1 N 0.787
MDP0000214823 Malus x domestica MDP0000214823 N 0.770
XM_002883237.1 Arabidopsis lyrata fgenesh2_kg.3__2330__AT3G21100.2 N 0.754
AT3G21100 Arabidopsis thaliana AT3G21100-TAIR-G N 0.738
XM_002891597.1 Arabidopsis lyrata fgenesh2_kg.1__4219__AT1G51520.1 N 0.738
GSVIVG00030048001 Vitis vinifera GSVIVG00030048001 N 0.721
e_gw1.43.473.1 Selaginella moellendorfii e_gw1.43.473.1 N 0.705