LOC_Os04g53330 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os04g53330 T45030_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g53330.1 RRM 5 71
LOC_Os04g53330.2 RRM 5 71

Links

Other RRM family RBPs
Other Oryza sativa RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE016670 Oryza indica BGIOSIBCE016670 N 1.000
GRMZM2G414304 Zea mays GRMZM2G414304 N 0.754
BRADI3G52270 Brachypodium distachyon BRADI3G52270 N 0.754
GSVIVG00024381001 Vitis vinifera GSVIVG00024381001 N 0.746
BRADI1G51740 Brachypodium distachyon BRADI1G51740 N 0.746
BGIOSIBCE020376 Oryza indica BGIOSIBCE020376 N 0.731
PDK_20s1346002g005 Phoenix dactylifera PDK_20s1346002g005 N 0.731
GRMZM2G102808 Zea mays GRMZM2G102808 N 0.731
LOC_Os06g02240 Oryza sativa LOC_Os06g02240 N 0.731
GRMZM2G051890 Zea mays GRMZM2G051890 N 0.731
SB10G000940 Sorghum bicolor Sb10g000940 N 0.731
SB04G031100 Sorghum bicolor Sb04g031100 N 0.725
GSVIVG00013098001 Vitis vinifera GSVIVG00013098001 N 0.716
Medtr8g077770 Medicago truncatula Medtr8g077770 N 0.716
PDK_20s1613681g001 Phoenix dactylifera PDK_20s1613681g001 N 0.716
mgf007506m Mimulus guttatus mgf007506m N 0.701