B9H2J4_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0004s05450 T45494_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s05450.1 RRM 77 145
POPTR_0004s05450.1 RRM 164 233

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9I1M7_POPTR Populus trichocarpa POPTR_0011s07480 N 0.950
29900.m001607 Ricinus communis 29900.m001607 N 0.800
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.793
cassava28996.valid.m1 Manihot esculenta cassava28996.valid.m1 N 0.750
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 0.750
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 0.750
PK03611.1 Cannabis sativa PK03611.1 N 0.748
MDP0000709988 Malus x domestica MDP0000709988 N 0.743