cassava28996.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava28996.valid.m1 T49257_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava28996.valid.m1 RRM 77 146
cassava28996.valid.m1 RRM 169 238

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava28994.valid.m1 Manihot esculenta cassava28994.valid.m1 N 1.000
cassava28995.valid.m1 Manihot esculenta cassava28995.valid.m1 N 1.000
cassava18809.valid.m1 Manihot esculenta cassava18809.valid.m1 N 0.936
29900.m001607 Ricinus communis 29900.m001607 N 0.893
B9I1M7_POPTR Populus trichocarpa POPTR_0011s07480 N 0.757
PK03611.1 Cannabis sativa PK03611.1 N 0.757
B9H2J4_POPTR Populus trichocarpa POPTR_0004s05450 N 0.750
mgf018937m Mimulus guttatus mgf018937m N 0.725
B9GGV7_POPTR Populus trichocarpa POPTR_0001s38640 N 0.721
MDP0000596919 Malus x domestica MDP0000596919 N 0.714
MDP0000250519 Malus x domestica MDP0000250519 N 0.714
AT3G15010 Arabidopsis thaliana AT3G15010-TAIR-G N 0.707
ppa005857m Prunus persica ppa005857m N 0.700
Cucsa.273510 Cucumis sativus Cucsa.273510 N 0.700